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Report for CCDS37202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37202.1 Public Mus musculus 15 Bcdin3d 23 108 98 CCDS HistoryNCBI Gene:75284Re-query CCDS DB by CCDS ID:37202.1Re-query CCDS DB by GeneID:75284See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37202.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040313.5 ENSMUSP00000041809.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040313.5Link to Ensembl Protein Viewer:ENSMUSP00000041809.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000040313Re-query CCDS DB by Protein ID:ENSMUSP00000041809
Original member Current member NCBI NM_029236.2 NP_083512.2 Accepted alive Link to Nucleotide Sequence:NM_029236.2Link to Protein Sequence:NP_083512.2Re-query CCDS DB by Nucleotide ID:NM_029236Re-query CCDS DB by Protein ID:NP_083512Link to BLAST:NP_083512.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083512.2 285 Q91YP1 285 100% 0 0

Chromosomal Locations for CCDS 37202.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 99470459 99471079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 99474456 99474692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGGCCGCAGACGGGACATTGTCAAGAGGGGGCGTTGGAGAGGCTGTGGAGGAAGAGCATCCGGGGGCTC
TGGAACCCGGGGCCGCCCCGTTCGGAAATTTCCCTCATTATTCCCGCTTCCACCCTCCCGAGCAAAGGCT
CCGCCTTCTGCCCCCGGAGCTTCTTCGGCAGCTCTTCCCTCCCGAGGGTCCCGAGAAGAGGCCGATCCTA
GGGCTCGACGTGGGGTGTAACTCCGGGGATCTGAGTGTGGCTCTGTACAAACATTTCCTTTCCCCTCGCG
ATGGGGAGACCTGCTCCGGTGCATCCAGAGAACTCCGCATCCTCTGCTGTGATATAGATCCAGTCCTTGT
GGAGAGGGCTGAAAGAGACTGTCCCTTCCCTGAGGCTTTGACCTTTATCACCCTGGACATCATGGATCAA
GAGAGCAGGAAGGTTCCCTTGAGTTCTTTCTTGAGCCAGTTTGGGCGTTCCGTTTTTGACATGGTCTTCT
GCATGTCAGTAACCATGTGGATTCATCTGAACCACGGGGACCGTGGTCTGTGCGAGTTCCTGGCCCACGT
CTCCTCTCTCTGCAGCTACCTCCTCGTGGAGCCACAACCCTGGAAGTGTTACCGGGCAGCTGCAAGGCGC
CTGCGCAAGCTGGGACTCCACAGTTTTGATCACTTCCGCTCGCTGGCCATCCGAGGTGACATGGCCAAGC
AGATCGTGCGGATCTTGACGCAGGACCACGGGATGGAGTTAGCGTGCTGTTTCGGCAACACCAGTTGGGA
CCGAAGCCTTCTGCTCTTCAGAGCAAAGCACACCCACGAGACTCAGGCAATCCCCGAATCGTCAACAAAA
GAGACACGGACAGATTAA

Translation (285 aa):
MAADGTLSRGGVGEAVEEEHPGALEPGAAPFGNFPHYSRFHPPEQRLRLLPPELLRQLFPPEGPEKRPIL
GLDVGCNSGDLSVALYKHFLSPRDGETCSGASRELRILCCDIDPVLVERAERDCPFPEALTFITLDIMDQ
ESRKVPLSSFLSQFGRSVFDMVFCMSVTMWIHLNHGDRGLCEFLAHVSSLCSYLLVEPQPWKCYRAAARR
LRKLGLHSFDHFRSLAIRGDMAKQIVRILTQDHGMELACCFGNTSWDRSLLLFRAKHTHETQAIPESSTK
ETRTD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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