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Report for CCDS12713.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12713.1 Public Homo sapiens 19 ZNF114 24 110 108 CCDS HistoryNCBI Gene:163071Re-query CCDS DB by CCDS ID:12713.1Re-query CCDS DB by GeneID:163071See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12713.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315849.5 ENSP00000318898.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315849.5Link to Ensembl Protein Viewer:ENSP00000318898.1Re-query CCDS DB by Nucleotide ID:ENST00000315849Re-query CCDS DB by Protein ID:ENSP00000318898
Original member Current member EBI ENST00000595607.6 ENSP00000469998.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000595607.6Link to Ensembl Protein Viewer:ENSP00000469998.1Re-query CCDS DB by Nucleotide ID:ENST00000595607Re-query CCDS DB by Protein ID:ENSP00000469998
Original member Current member EBI ENST00000600687.5 ENSP00000471727.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600687.5Link to Ensembl Protein Viewer:ENSP00000471727.1Re-query CCDS DB by Nucleotide ID:ENST00000600687Re-query CCDS DB by Protein ID:ENSP00000471727
Original member Current member NCBI NM_001331097.1 NP_001318026.1 Accepted alive Link to Nucleotide Sequence:NM_001331097.1Link to Protein Sequence:NP_001318026.1Re-query CCDS DB by Nucleotide ID:NM_001331097Re-query CCDS DB by Protein ID:NP_001318026Link to BLAST:NP_001318026.1
Original member Current member NCBI NM_001369811.1 NP_001356740.1 Accepted alive Link to Nucleotide Sequence:NM_001369811.1Link to Protein Sequence:NP_001356740.1Re-query CCDS DB by Nucleotide ID:NM_001369811Re-query CCDS DB by Protein ID:NP_001356740Link to BLAST:NP_001356740.1
Original member Current member NCBI NM_001369812.1 NP_001356741.1 Accepted alive Link to Nucleotide Sequence:NM_001369812.1Link to Protein Sequence:NP_001356741.1Re-query CCDS DB by Nucleotide ID:NM_001369812Re-query CCDS DB by Protein ID:NP_001356741Link to BLAST:NP_001356741.1
Original member Current member NCBI NM_153608.4 NP_705836.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153608.4Link to Protein Sequence:NP_705836.1Re-query CCDS DB by Nucleotide ID:NM_153608Re-query CCDS DB by Protein ID:NP_705836Link to BLAST:NP_705836.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001318026.1 417 Q8NC26-1 417 100% 0 0
NP_001356740.1 417 Q8NC26-1 417 100% 0 0
NP_001356741.1 417 Q8NC26-1 417 100% 0 0
NP_705836.1 417 Q8NC26-1 417 100% 0 0

Chromosomal Locations for CCDS 12713.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 48279800 48279808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48282371 48282497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 48285761 48286878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGTCCCAGGACTCGGTGACCTTCGCAGACGTGGCTGTGAACTTCACCAAAGAGGAGTGGACCCTGCTGG
ACCCAGCTCAGAGGAATCTCTACAGAGACGTGATGCTGGAAAATTCTAGGAACTTGGCATTCATAGATTG
GGCAACTCCATGTAAAACCAAAGACGCAACCCCTCAGCCGGATATTCTTCCTAAAAGAACATTTCCTGAA
GCCAACAGAGTGTGTCTCACGAGCATCAGTTCCCAGCACTCCACATTAAGAGAAGACTGGAGATGCCCCA
AAACAGAGGAACCACACAGGCAGGGGGTGAATAATGTGAAGCCACCTGCAGTTGCCCCTGAGAAAGATGA
ATCTCCTGTTAGCATTTGTGAAGATCATGAAATGAGGAACCACTCTAAACCTACCTGCAGGCTTGTGCCT
TCACAGGGAGATTCCATAAGACAATGTATCCTAACACGTGACTCAAGTATTTTCAAGTATAATCCTGTCT
TAAACGATAGTCAAAAAACACATGAAAACAACGAAGACGATGGAGTCTTGGGGTGGAACATTCAGTGGGT
TCCGTGTGGGAGAAAAACAGAGCTGAAATCAAGCACATGGACTGGCAGTCAGAACACTGTGCATCATATA
CGTGATGAAATTGATACGGGGGCCAACAGGCACCAGCGGAATCCATTTGGAAAAGCTTTCCGTGAAGACG
GATCCCTTAGGGCACACAACACTCATGGTCGAGAGAAAATGTATGATTTTACTCAGTGCGAGAACACCTC
CAGAAATAACTCAATTCACGCCATGCAGATGCAGTTGTATACCGCAGAGACAAACAAGAAGGATTGTCAA
ACTGGGGCAACCTCTGCCAACGCTCCAAATTCCGGTTCACACAAGAGTCATTGCACTGGAGAGAAAACCC
ATAAATGCCCCGAATGTGGGAGAGCCTTTTTTTATCAGTCATTCCTTATGAGACATATGAAAATTCACAC
TGGAGAGAAACCGTATGAATGTGGGAAATGTGGGAAAGCCTTTAGATATTCCTTACACCTTAATAAACAT
TTAAGAAAGCATGTTGTGCAGAAGAAGCCCTACGAATGTGAAGAATGTGGGAAAGTCATTCGGGAGTCCT
CAAAATATACACATATAAGGAGCCACACTGGAGAGAAACCCTATAAATGTAAGACATGTGGAAAAGACTT
TGCAAAGTCGTCAGGACTTAAAAAACATCTTAAGACTCACAAAGATGAGAAGCCCTGTGAATGA

Translation (417 aa):
MSQDSVTFADVAVNFTKEEWTLLDPAQRNLYRDVMLENSRNLAFIDWATPCKTKDATPQPDILPKRTFPE
ANRVCLTSISSQHSTLREDWRCPKTEEPHRQGVNNVKPPAVAPEKDESPVSICEDHEMRNHSKPTCRLVP
SQGDSIRQCILTRDSSIFKYNPVLNDSQKTHENNEDDGVLGWNIQWVPCGRKTELKSSTWTGSQNTVHHI
RDEIDTGANRHQRNPFGKAFREDGSLRAHNTHGREKMYDFTQCENTSRNNSIHAMQMQLYTAETNKKDCQ
TGATSANAPNSGSHKSHCTGEKTHKCPECGRAFFYQSFLMRHMKIHTGEKPYECGKCGKAFRYSLHLNKH
LRKHVVQKKPYECEECGKVIRESSKYTHIRSHTGEKPYKCKTCGKDFAKSSGLKKHLKTHKDEKPCE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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