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Report for CCDS12977.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12977.1 Public Homo sapiens 19 ZNF497 24 110 108 CCDS HistoryNCBI Gene:162968Re-query CCDS DB by CCDS ID:12977.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12977.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311044.8 ENSP00000311183.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311044.8Link to Ensembl Protein Viewer:ENSP00000311183.2Re-query CCDS DB by Nucleotide ID:ENST00000311044Re-query CCDS DB by Protein ID:ENSP00000311183
Original member Current member EBI ENST00000425453.3 ENSP00000402815.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425453.3Link to Ensembl Protein Viewer:ENSP00000402815.2Re-query CCDS DB by Nucleotide ID:ENST00000425453Re-query CCDS DB by Protein ID:ENSP00000402815
Original member Current member NCBI NM_001207009.2 NP_001193938.1 Accepted alive Link to Nucleotide Sequence:NM_001207009.2Link to Protein Sequence:NP_001193938.1Re-query CCDS DB by Nucleotide ID:NM_001207009Re-query CCDS DB by Protein ID:NP_001193938Link to BLAST:NP_001193938.1
Original member Current member NCBI NM_198458.3 NP_940860.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198458.3Link to Protein Sequence:NP_940860.2Re-query CCDS DB by Nucleotide ID:NM_198458Re-query CCDS DB by Protein ID:NP_940860Link to BLAST:NP_940860.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193938.1 498 Q6ZNH5 498 100% 0 0
NP_940860.2 498 Q6ZNH5 498 100% 0 0

Chromosomal Locations for CCDS 12977.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 58356139 58357635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1497 nt):
ATGGAGTCCCCAAGAGGGTGGACCCTGCAGGTGGCCCCAGAGGAAGGCCAGGTCCTCTGCAATGTGAAGA
CTGCCACGAGGGGCCTCTCTGAGGGGGCTGTGTCTGGAGGCTGGGGGGCCTGGGAAAACTCCACGGAGGT
TCCGAGGGAGGCAGGGGACGGCCAGCGGCAGCAAGCCACACTGGGGGCGGCGGACGAACAGGGAGGCCCC
GGCAGGGAGCTGGGCCCCGCAGACGGTGGGCGGGACGGGGCTGGGCCCAGGAGCGAGCCTGCAGACCGGG
CGTTGCGCCCTTCGCCTCTCCCAGAGGAGCCGGGCTGCCGGTGCGGGGAGTGCGGCAAGGCGTTCAGCCA
GGGCTCTTACTTGCTGCAGCATCGGCGCGTGCACACAGGCGAGAAGCCGTACACGTGCCCCGAGTGCGGC
AAGGCCTTCGCCTGGAGCTCCAACCTCAGCCAGCACCAGCGCATCCACAGCGGCGAGAAGCCCTACGCTT
GCAGGGAGTGCGGCAAGGCCTTCCGCGCGCACTCGCAGCTCATCCACCACCAGGAGACACACAGCGGCCT
GAAGCCCTTCCGCTGCCCGGACTGCGGCAAGTCCTTCGGCCGAAGCACCACGCTGGTGCAGCACCGACGC
ACGCACACGGGCGAGAAGCCCTACGAGTGCCCGGAGTGCGGCAAGGCCTTCAGCTGGAACTCCAATTTCC
TGGAGCACCGGCGCGTGCACACGGGCGCGCGGCCGCACGCCTGCCGGGACTGTGGCAAGGCCTTCAGCCA
GAGCTCCAACCTGGCCGAGCACCTGAAGATCCACGCGGGCGCACGGCCACACGCCTGTCCCGACTGCGGC
AAGGCCTTCGTGCGTGTGGCGGGGCTGCGGCAGCACCGGCGCACGCACAGCAGCGAGAAGCCCTTCCCCT
GCGCCGAGTGCGGAAAGGCTTTCCGCGAGAGCTCGCAGCTCCTGCAGCACCAGCGCACGCACACTGGTGA
GCGGCCCTTCGAGTGCGCCGAGTGCGGCCAGGCTTTCGTCATGGGCTCCTACCTGGCGGAGCACCGGCGC
GTGCACACGGGCGAGAAGCCTCATGCGTGCGCCCAGTGCGGCAAGGCCTTCAGCCAGCGCTCCAACCTAC
TGAGCCACCGGCGCACGCACTCGGGCGCCAAGCCCTTCGCCTGCGCCGACTGCGGCAAGGCCTTCCGCGG
CAGTTCCGGCCTGGCGCACCACCGGCTTTCGCACACGGGAGAGCGACCCTTCGCCTGCGCAGAATGCGGC
AAGGCCTTCCGCGGCAGCTCCGAGCTGCGCCAGCACCAGCGCCTGCACTCTGGCGAGAGGCCGTTCGTCT
GCGCCCACTGCAGCAAGGCCTTCGTGCGCAAGTCGGAGCTCTTAAGCCACCGGCGCACGCACACGGGCGA
GAGGCCCTACGCTTGCGGCGAGTGCGGGAAGCCTTTCAGCCACCGTTGCAACCTCAACGAGCACCAGAAG
CGGCACGGGGGCCGCGCTGCGCCCTGA

Translation (498 aa):
MESPRGWTLQVAPEEGQVLCNVKTATRGLSEGAVSGGWGAWENSTEVPREAGDGQRQQATLGAADEQGGP
GRELGPADGGRDGAGPRSEPADRALRPSPLPEEPGCRCGECGKAFSQGSYLLQHRRVHTGEKPYTCPECG
KAFAWSSNLSQHQRIHSGEKPYACRECGKAFRAHSQLIHHQETHSGLKPFRCPDCGKSFGRSTTLVQHRR
THTGEKPYECPECGKAFSWNSNFLEHRRVHTGARPHACRDCGKAFSQSSNLAEHLKIHAGARPHACPDCG
KAFVRVAGLRQHRRTHSSEKPFPCAECGKAFRESSQLLQHQRTHTGERPFECAECGQAFVMGSYLAEHRR
VHTGEKPHACAQCGKAFSQRSNLLSHRRTHSGAKPFACADCGKAFRGSSGLAHHRLSHTGERPFACAECG
KAFRGSSELRQHQRLHSGERPFVCAHCSKAFVRKSELLSHRRTHTGERPYACGECGKPFSHRCNLNEHQK
RHGGRAAP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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