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Report for CCDS12653.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12653.1 Public Homo sapiens 19 ZNF296 24 110 108 CCDS HistoryNCBI Gene:162979Re-query CCDS DB by CCDS ID:12653.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12653.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303809.7 ENSP00000302770.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303809.7Link to Ensembl Protein Viewer:ENSP00000302770.1Re-query CCDS DB by Nucleotide ID:ENST00000303809Re-query CCDS DB by Protein ID:ENSP00000302770
Original member Current member NCBI NM_145288.3 NP_660331.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145288.3Link to Protein Sequence:NP_660331.1Re-query CCDS DB by Nucleotide ID:NM_145288Re-query CCDS DB by Protein ID:NP_660331Link to BLAST:NP_660331.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660331.1 475 Q8WUU4 475 100% 0 0

Chromosomal Locations for CCDS 12653.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45071601 45072580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45075713 45075862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45076076 45076373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGTCCCGCCGCAAGGCCGGCAGCGCGCCCCGCCGAGTAGAGCCCGCGCCCGCCGCCAACCCAGACGACG
AG
ATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGCGCAGCCCCAACAGGCCCCAAG
G
CTGGGGCCCTTCTCCCCGAAGGAGGTGTCCTCGGCGGGGCGGTTCGGCGGCGAACCCCACCACTCCCCT
GGC
CCCATGCCCGCCGGGGCCGCCCTCCTCGCCCTCGGCCCGCGGAACCCGTGGACCCTGTGGACGCCGT
TG
ACCCCGAACTATCCCGACCGCCAGCCCTGGACCGACAAACACCCAGATCTGTTGACCTGCGGCCGCTG
C
CTGCAGACCTTCCCGTTGGAGGCCATCACTGCCTTCATGGACCACAAGAAGCTGGGCTGTCAGCTCTTC
AGA
GGCCCCAGCCGCGGCCAGGGCTCAGAACGAGAGGAGCTGAAGGCCTTGAGCTGCCTGCGCTGTGGCA
AA
CAGTTCACAGTGGCCTGGAAGCTGCTGCGTCACGCCCAGTGGGACCACGGACTGTCCATCTACCAGAC
A
GAATCAGAGGCCCCGGAGGCCCCGCTCCTGGGCCTGGCCGAGGTGGCTGCAGCCGTGTCGGCAGTGGTG
GGG
CCAGCAGCTGAGGCCAAGAGCCCCCGTGCAAGTGGCAGCGGCCTCACCCGGCGGAGCCCCACCTGTC
CT
GTGTGCAAGAAGACCCTCAGCTCCTTCAGCAACCTCAAAGTGCACATGCGCTCACACACAGGCGAGCG
G
CCCTATGCTTGCGACCAGTGTCCCTACGCCTGCGCCCAGAGCAGCAAGCTCAACCGCCACAAGAAGACC
CAC
CGGCAGGTGCCGCCCCAGAGCCCCCTCATGGCCGACACCAGCCAGGAGCAGGCCTCTGCAGCCCCTC
CG
GAGCCGGCTGTCCATGCTGCTGCCCCCACCAGCACCCTTCCATGCAGCGGTGGTGAGGGGGCTGGAGC
C
GCCGCCACAGCAGGTGTCCAGGAACCCGGGGCTCCTGGCAGTGGGGCTCAAGCCGGCCCTGGTGGAGAC
ACT
TGGGGAGCCATCACCACGGAACAAAGAACTGACCCTGCAAACAGCCAGAAGGCATCACCCAAAAAGA
TG
CCCAAGTCAGGGGGCAAGAGCCGCGGGCCCGGGGGCAGCTGTGAGTTCTGCGGGAAGCATTTTACCAA
C
AGCAGCAACCTGACGGTGCACCGGCGCTCACACACCGGGGAGCGCCCCTACACCTGTGAGTTCTGCAAC
TAC
GCCTGCGCCCAGAGCAGTAAGCTCAACCGCCACCGCCGCATGCACGGCATGACGCCTGGCAGCACCC
GC
TTCGAGTGCCCCCACTGCCATGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCAGAA
G
CACCCTGAGGCGGCCGGCGAGGCCTGA


Translation (475 aa):
MSRRKAGSAPRRVEPAPAANPDDEMEMQDLVIELKPEPDAQPQQAPRLGPFSPKEVSSAGRFGGEPHHSP
G
PMPAGAALLALGPRNPWTLWTPLTPNYP
DRQPWTDKHPDLLTCGRCLQTFPLEAITAFMDHKKLGCQLF
R
GPSRGQGS
EREELKALSCLRCGKQFTVAWKLLRHAQWDHGLSIYQTESEAPEAPLLGLAEVAAAVSAVV
G
PAAEAKSPRASGSGLTRRSPTCPVCKKTLSSFSNLKVHMRSHTGERPYACDQCPYACAQSSKLNRHKKT
H
RQVPPQSPLMADTSQEQASAAPPEPAVHAAAPTSTLPCSGGEGAGAAATAGVQEPGAPGSGAQAGPGGD
T
WGAITTEQRTDPANSQKASPKKMPKSGGKSRGPGGSCEFCGKHFTNSSNLTVHRRSHTGERPYTCEFCN
Y
ACAQSSKLNRHRRMHGMTPGSTRFECPHCHVPFGLRATLDKHLRQKHPEAAGEA




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 Genome Browser Links:   Ensembl Genome Browser
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