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Report for CCDS46160.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46160.1 Public Homo sapiens 19 ZNF577 24 110 108 CCDS HistoryNCBI Gene:84765Re-query CCDS DB by CCDS ID:46160.1Re-query CCDS DB by GeneID:84765See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46160.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000451628.9 ENSP00000389652.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000451628.9Link to Ensembl Protein Viewer:ENSP00000389652.2Re-query CCDS DB by Nucleotide ID:ENST00000451628Re-query CCDS DB by Protein ID:ENSP00000389652
Original member Current member EBI ENST00000639636.2 ENSP00000491349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000639636.2Link to Ensembl Protein Viewer:ENSP00000491349.1Re-query CCDS DB by Nucleotide ID:ENST00000639636Re-query CCDS DB by Protein ID:ENSP00000491349
Original member Current member NCBI NM_001135590.2 NP_001129062.1 Accepted alive Link to Nucleotide Sequence:NM_001135590.2Link to Protein Sequence:NP_001129062.1Re-query CCDS DB by Nucleotide ID:NM_001135590Re-query CCDS DB by Protein ID:NP_001129062Link to BLAST:NP_001129062.1
Original member Current member NCBI NM_001370450.1 NP_001357379.1 Accepted alive Link to Nucleotide Sequence:NM_001370450.1Link to Protein Sequence:NP_001357379.1Re-query CCDS DB by Nucleotide ID:NM_001370450Re-query CCDS DB by Protein ID:NP_001357379Link to BLAST:NP_001357379.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129062.1 426 Q9BSK1-2 426 100% 0 0
NP_001357379.1 426 Q9BSK1-2 426 100% 0 0

Chromosomal Locations for CCDS 46160.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51872532 51873529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51877282 51877377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51878389 51878515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51880323 51880382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1281 nt):
ATGAAAAATGCCACGATTGTAATGTCTGTGAGGAGAGAGCAAGGCAGTTCTTCAGGGGAGGGGTCATTGT
CATTCGAAGATGTGGCTGTGGGCTTCACCAGGGAGGAGTGGCAGTTTTTGGACCAGTCTCAGAAGGTCTT
GTACAAGGAAGTAATGTTGGAGAACTACATCAACCTAGTATCAATAGGGTATCGAGGCACCAAGCCAGAT
TCGCTCTTCAAGTTGGAGCAAGGAGAACCCCCAGGGATAGCAGAAGGAGCAGCCCACAGTCAAATCTGTC
CAGGAGGGAAACCACATGAATGCAGTGTGTGCGGGAGAGCCTTCTCCAGGAAAGCACAGCTTATTCAACA
TCAGAGAACTGAAAGAGGAGAGAAACCCCATGGATGTGGTGAATGTGGGAAAACATTCATGAGGAAGATT
CAGCTCACTGAGCATCAGAGAACTCACACAGGAGAGAAGCCCCATGAATGTAGTGAATGTGGAAAAGCCT
TCTCCAGAAAGTCACAGCTCATGGTCCATCAGAGAACCCATACAGGAGAGAAACCCTACAGATGCAGCAA
ATGCGGAAAAGCCTTCAGCCGGAAGTGCCGGCTCAATAGACATCAGCGATCACATACTGGAGAGAAACTC
TATGGGTGCAGTGTGTGTGGGAAAGCCTTTTCTCAGAAGGCATACCTCACTGCACACCAGAGACTTCACA
CAGGAGATAAGCCTTATAAATGCAGTGATTGTGGAAGAACCTTCTATTTTAAGTCAGACCTGACCAGACA
TCAGAGGATTCATACGGGAGAGAAACCTTATGAATGTAGTGAGTGTGAAAAAGCCTTTAGAAGCAAGTCG
AAGCTCATTCAGCATCAGCGTACTCACACTGGAGAGAGACCATATTCATGCAGAGAATGTGGCAAAGCCT
TTGCCCACATGTCAGTCCTCATTAAACATGAGAAAACTCACATAAGAGAGACAGCCATAAATTCACTGAC
GGTGGAGAAACCTTCCTCAAGGAGTCATACCTCCTTATACATGAGCGAACTCATACAAGAGCAAAAGACT
GTGAACACAGTACCTATAGAAATGCCTTCCTCAGGAACCCCGCCATTGTTAAACAAGAGTGAGCGCCTAG
TGGGCAGAAATGTAGTGATTGTGGAACAACCTTTTCCAAGAAATCAAGCCTTTGTAGTTAATCAGGAATT
TGAACAGAGAATAAGCCTCACAAATGAAGTGAATGTGGCCCCATCAGTAATAAATTATATCTTGTATCTT
ACAGATATTGTATCAGAATAA

Translation (426 aa):
MKNATIVMSVRREQGSSSGEGSLSFEDVAVGFTREEWQFLDQSQKVLYKEVMLENYINLVSIGYRGTKPD
SLFKLEQGEPPGIAEGAAHSQICPGGKPHECSVCGRAFSRKAQLIQHQRTERGEKPHGCGECGKTFMRKI
QLTEHQRTHTGEKPHECSECGKAFSRKSQLMVHQRTHTGEKPYRCSKCGKAFSRKCRLNRHQRSHTGEKL
YGCSVCGKAFSQKAYLTAHQRLHTGDKPYKCSDCGRTFYFKSDLTRHQRIHTGEKPYECSECEKAFRSKS
KLIQHQRTHTGERPYSCRECGKAFAHMSVLIKHEKTHIRETAINSLTVEKPSSRSHTSLYMSELIQEQKT
VNTVPIEMPSSGTPPLLNKSERLVGRNVVIVEQPFPRNQAFVVNQEFEQRISLTNEVNVAPSVINYILYL
TDIVSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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