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Report for CCDS92692.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92692.1 Public Homo sapiens 19 CCDC106 24 110 108 CCDS HistoryNCBI Gene:29903Re-query CCDS DB by CCDS ID:92692.1Re-query CCDS DB by GeneID:29903See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92692.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000591241.1 ENSP00000466521.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591241.1Link to Ensembl Protein Viewer:ENSP00000466521.1Re-query CCDS DB by Nucleotide ID:ENST00000591241Re-query CCDS DB by Protein ID:ENSP00000466521
Original member Current member NCBI NM_001370471.1 NP_001357400.1 Accepted alive Link to Nucleotide Sequence:NM_001370471.1Link to Protein Sequence:NP_001357400.1Re-query CCDS DB by Nucleotide ID:NM_001370471Re-query CCDS DB by Protein ID:NP_001357400Link to BLAST:NP_001357400.1

Chromosomal Locations for CCDS 92692.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55649047 55649077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55649408 55649584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55651283 55651495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55652430 55652746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (738 nt):
ATGAATGACCGGAGCAGTCGGAGGCGGACAAAGCCTCCGGAGGCTGCGTCCTCCGCCCTGGCTCTGATGA
ACAGCGTCAAGACCCAGCTGCACATGGCTCTGGAGAGGAACTCCTGGCTGCAGAAGCGCATCGAGGACCT
GGAGGAAGAGAGGGACTTCCTGCGGTGCCAGCTGGACAAATTCATCTCTTCTGCTCGGATGGAGGCAGAG
GACCACTGCCGGATGAAGCCTGGGCCCAGGCGGATGGAGGGGGACAGCCGTGGTGGGGCTGGGGGCGAGG
CCTCGGACCCTGAGTCAGCAGCCTCCTCCCTCAGCGGAGCGTCCGAAGAAGGCAGCGCCAGTGAGAGGAG
GCGGCAGAAGCAGAAGGGAGGTGCTAGTCGGAGGCGCTTTGGGAAGCCCAAGGCCCGGGAGAGGCAGCGA
GTGAAGGACGCCGACGGGGTCCTCTGCCGGTACAAGAAGATCCTGGGCACCTTCCAGAAGCTCAAGAGCA
TGTCGCGGGCCTTCGAGCACCACCGCGTGGACAGGAACACCGTGGCGCTGACCACGCCCATCGCCGAGCT
GCTCATTGTGGCCCCCGAGAAGCTGGCCGAGGTGGGCGAGTTCGACCCCTCCAAGGAGCGCCTGCTCGAG
TACTCCCGCCGCTGCTTTCTGGCCCTGGACGACGAGACGCTCAAGAAGGTGCAGGCGCTCAAGAAGAGCA
AGCTGCTGCTGCCCATCACCTACCGCTTCAAGCGGTGA

Translation (245 aa):
MNDRSSRRRTKPPEAASSALALMNSVKTQLHMALERNSWLQKRIEDLEEERDFLRCQLDKFISSARMEAE
DHCRMKPGPRRMEGDSRGGAGGEASDPESAASSLSGASEEGSASERRRQKQKGGASRRRFGKPKARERQR
VKDADGVLCRYKKILGTFQKLKSMSRAFEHHRVDRNTVALTTPIAELLIVAPEKLAEVGEFDPSKERLLE
YSRRCFLALDDETLKKVQALKKSKLLLPITYRFKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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