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Report for CCDS22297.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22297.1 Public Mus musculus 8 Rwdd4a 23 108 98 CCDS HistoryNCBI Gene:192174Re-query CCDS DB by CCDS ID:22297.1Re-query CCDS DB by GeneID:192174See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22297.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033973.13 ENSMUSP00000033973.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033973.13Link to Ensembl Protein Viewer:ENSMUSP00000033973.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000033973Re-query CCDS DB by Protein ID:ENSMUSP00000033973
Original member Current member NCBI NM_203507.3 NP_987103.1 Accepted alive Link to Nucleotide Sequence:NM_203507.3Link to Protein Sequence:NP_987103.1Re-query CCDS DB by Nucleotide ID:NM_203507Re-query CCDS DB by Protein ID:NP_987103Link to BLAST:NP_987103.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_987103.1 188 Q9CPR1 188 100% 0 0

Chromosomal Locations for CCDS 22297.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 47533920 47533943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47537279 47537359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47542692 47542801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47542882 47543029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47544111 47544228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47547789 47547838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47547972 47547974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 47550695 47550727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGGGTGCCAACGAGGACCAAGAGATGGAGCTAGAAGCTTTACGGTCTATTTATGAAGGAGATAACAGTT
TCCGGGAATTAAGTCCAGTGTCATTTCAATATAGGATAGGTGAAGACGGCGATCCCAAAGCCTTCCTGAT
AGAGGTTTCCTGGACGGAGACATACCCGCAGACAGCTCCGGTCATATCTATGAACGCCTTTTTTAACAAC
ACCATCTCCTCGGCAGTGAAGCAGAGCATCTTAGCCAAGCTGCAGGAAGCAGTGGAAGTGAATCTCGGCA
CGGCCATGACCTACACGTTGTTCGAGTACGCTAAGGACCATAAAGAGCAGTTCATGGAGAACCACCATCC
TGGGAATTCTGCAACGCCTGTAGCCAATATCATCTCGGTTGAAACTCCCACCACAGCCCCATCAAGTAAG
AAAAAAGAGAAGAAAGAACAACTTTCCAAAGCTCAGAAACGCAAGCTGGCAGATAAAACAGATCACAAAG
GGGAGCTGCCTCGCGGCTGGAACTGGGTTGACGTCGTGAAGCATTTAAGCAAAACTGGCTCTAAAGATGA
TGAGTAG

Translation (188 aa):
MGANEDQEMELEALRSIYEGDNSFRELSPVSFQYRIGEDGDPKAFLIEVSWTETYPQTAPVISMNAFFNN
TISSAVKQSILAKLQEAVEVNLGTAMTYTLFEYAKDHKEQFMENHHPGNSATPVANIISVETPTTAPSSK
KKEKKEQLSKAQKRKLADKTDHKGELPRGWNWVDVVKHLSKTGSKDDE


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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