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Report for CCDS11190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11190.1 Public Homo sapiens 17 GID4 24 110 108 CCDS HistoryNCBI Gene:79018Re-query CCDS DB by CCDS ID:11190.1Re-query CCDS DB by GeneID:79018See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11190.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000268719.9 ENSP00000268719.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000268719.9Link to Ensembl Protein Viewer:ENSP00000268719.4Re-query CCDS DB by Nucleotide ID:ENST00000268719Re-query CCDS DB by Protein ID:ENSP00000268719
Original member Current member NCBI NM_024052.5 NP_076957.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024052.5Link to Protein Sequence:NP_076957.3Re-query CCDS DB by Nucleotide ID:NM_024052Re-query CCDS DB by Protein ID:NP_076957Link to BLAST:NP_076957.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076957.3 300 Q8IVV7 300 100% 0 0

Chromosomal Locations for CCDS 11190.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 18039465 18039902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18045147 18045206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18054127 18054234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18058868 18058969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18061845 18061975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 18065180 18065243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (903 nt):
ATGTGTGCGCGAGGGCAAGTCGGGAGGGGGACCCAGCTCAGGACTGGGAGGCCCTGCTCGCAGGTCCCTG
GGTCCCGGTGGCGGCCGGAGCGCTTGCTCCGCAGGCAGCGGGCGGGTGGTCGCCCCTCCCGCCCCCACCC
CGCGCGTGCGCGCCCCGGCCTCTCCCTCCCCGCCACCCTCCTCGGCTCCCGCGCGGCGGCGGCGGTTCCT
CTCCCACTCCCCCCAGCCCTGGCTCCGGGGGACCCCGCGATGCCGGTCCGCACCGAGTGTCCCCCGCCGG
CCGGTGCCTCCGCTGCCTCCGCGGCCTCACTCATCCCGCCGCCGCCCATCAACACCCAGCAGCCCGGCGT
GGCCACCAGCCTGCTCTACAGCGGCTCCAAGTTCCGCGGCCACCAGAAGAGCAAGGGGAACTCGTACGAC
GTAGAGGTGGTGCTGCAGCACGTGGACACGGGGAACTCTTACCTTTGTGGGTACTTGAAGATTAAAGGCC
TTACTGAGGAGTATCCAACCCTTACAACCTTCTTCGAAGGAGAAATAATCAGCAAAAAACACCCTTTCTT
AACTCGCAAGTGGGATGCAGATGAAGATGTTGATCGGAAACACTGGGGCAAGTTTCTGGCTTTTTATCAG
TATGCAAAATCATTTAACTCAGATGACTTTGATTATGAAGAGCTGAAGAATGGAGACTACGTCTTCATGA
GGTGGAAGGAACAGTTTCTGGTCCCAGATCACACGATCAAAGACATCAGTGGTGCTTCTTTTGCCGGGTT
CTACTACATCTGCTTTCAGAAGTCAGCAGCCTCCATAGAGGGCTACTACTACCATAGGAGTTCAGAATGG
TATCAGTCCCTCAATCTAACCCATGTTCCTGAACACAGTGCACCCATCTATGAATTCCGGTGA

Translation (300 aa):
MCARGQVGRGTQLRTGRPCSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAVP
LPLPPALAPGDPAMPVRTECPPPAGASAASAASLIPPPPINTQQPGVATSLLYSGSKFRGHQKSKGNSYD
VEVVLQHVDTGNSYLCGYLKIKGLTEEYPTLTTFFEGEIISKKHPFLTRKWDADEDVDRKHWGKFLAFYQ
YAKSFNSDDFDYEELKNGDYVFMRWKEQFLVPDHTIKDISGASFAGFYYICFQKSAASIEGYYYHRSSEW
YQSLNLTHVPEHSAPIYEFR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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