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Report for CCDS9140.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9140.1 Public Homo sapiens 12 ANKRD13A 24 110 108 CCDS HistoryNCBI Gene:88455Re-query CCDS DB by CCDS ID:9140.1Re-query CCDS DB by GeneID:88455See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9140.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261739.9 ENSP00000261739.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261739.9Link to Ensembl Protein Viewer:ENSP00000261739.4Re-query CCDS DB by Nucleotide ID:ENST00000261739Re-query CCDS DB by Protein ID:ENSP00000261739
Original member Current member NCBI NM_033121.2 NP_149112.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033121.2Link to Protein Sequence:NP_149112.1Re-query CCDS DB by Nucleotide ID:NM_033121Re-query CCDS DB by Protein ID:NP_149112Link to BLAST:NP_149112.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149112.1 590 Q8IZ07 590 100% 0 0

Chromosomal Locations for CCDS 9140.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 109999689 109999784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110012005 110012137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110013125 110013249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110016388 110016433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110018345 110018488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110019139 110019328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110024046 110024112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110025742 110025823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110027705 110027766 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110028512 110028642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110029478 110029635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110030645 110030758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110033797 110033957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110036261 110036328 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 110037359 110037554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1773 nt):
ATGTCCTCGGCCTGCGACGCGGGCGACCACTACCCCCTGCACCTCCTAGTCTGGAAAAACGACTACCGGC
AGCTCGAGAAGGAGCTGCAGGGCCAGAATGTGGAGGCTGTGGACCCACGAGGTCGAACATTATTGCATCT
TGCTGTTTCCTTGGGACATTTGGAATCTGCTCGAGTCTTACTCCGACATAAAGCAGATGTGACAAAAGAA
AATCGCCAGGGATGGACAGTTTTACATGAGGCTGTGAGCACTGGCGATCCTGAGATGGTGTACACAGTTC
TCCAACATCGAGACTACCACAACACATCCATGGCCCTTGAGGGAGTTCCTGAGCTGCTCCAAAAAATTCT
CGAGGCTCCGGATTTCTATGTGCAGATGAAATGGGAATTCACCAGCTGGGTGCCCTTGGTTTCTAGAATA
TGCCCAAATGATGTCTGTCGCATCTGGAAAAGTGGTGCCAAACTGCGCGTCGATATCACATTGCTGGGAT
TTGAAAACATGAGCTGGATAAGAGGGAGGCGTAGTTTTATATTTAAGGGAGAAGACAACTGGGCGGAGTT
AATGGAAGTCAACCATGATGACAAAGTGGTCACCACCGAACGCTTCGACCTTTCCCAAGAAATGGAGCGC
CTCACTCTGGACTTGATGAAGCCAAAAAGCAGGGAAGTTGAGCGGCGGCTCACAAGCCCTGTCATTAACA
CCAGCCTCGATACTAAAAATATTGCTTTTGAAAGAACTAAATCCGGATTCTGGGGCTGGAGGACAGATAA
AGCAGAAGTTGTTAATGGTTACGAAGCAAAGGTTTACACAGTAAACAATGTGAATGTGATCACCAAAATA
CGCACAGAACATCTGACCGAGGAGGAAAAAAAGAGATATAAAGCAGACAGGAACCCGCTGGAATCTTTGC
TGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCACGGAATGTGCTACTGCAAACAACCC
CACAGCCATCACGCCTGATGAGTACTTCAATGAAGAGTTTGATCTGAAAGACAGGGACATTGGAAGGCCG
AAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTC
TGGTGGAGCAGGTCATTCCCATCATTGACCTAATGGCTCGAACGAGTGCTCATTTTGCAAGACTGAGAGA
TTTCATCAAATTGGAATTCCCACCTGGATTTCCTGTCAAAATAGAAATTCCCTTGTTTCATGTCTTAAAT
GCACGGATTACATTTGGAAATGTTAATGGCTGTAGCACTGCCGAAGAATCTGTATCTCAAAATGTGGAAG
GGACCCAGGCTGATTCAGCTTCCCACATCACAAACTTTGAGGTTGATCAATCTGTGTTTGAAATTCCCGA
ATCTTACTATGTTCAAGACAATGGCAGAAATGTGCATTTGCAAGATGAAGATTACGAGATAATGCAGTTT
GCCATCCAGCAAAGTCTGCTGGAGTCCAGCAGGAGCCAGGAACTTTCAGGACCAGCTTCGAATGGAGGGA
TCAGCCAGACAAACACCTATGACGCCCAGTATGAGAGGGCCATCCAGGAGAGCCTCCTCACCAGCACAGA
AGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTC
TCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGAGGAAGAGGCTGAGCTCCAGCAAGTCTTAC
AGCTGTCACTCACTGACAAATAG

Translation (590 aa):
MSSACDAGDHYPLHLLVWKNDYRQLEKELQGQNVEAVDPRGRTLLHLAVSLGHLESARVLLRHKADVTKE
NRQGWTVLHEAVSTGDPEMVYTVLQHRDYHNTSMALEGVPELLQKILEAPDFYVQMKWEFTSWVPLVSRI
CPNDVCRIWKSGAKLRVDITLLGFENMSWIRGRRSFIFKGEDNWAELMEVNHDDKVVTTERFDLSQEMER
LTLDLMKPKSREVERRLTSPVINTSLDTKNIAFERTKSGFWGWRTDKAEVVNGYEAKVYTVNNVNVITKI
RTEHLTEEEKKRYKADRNPLESLLGTVEHQFGAQGDLTTECATANNPTAITPDEYFNEEFDLKDRDIGRP
KELTIRTQKFKAMLWMCEEFPLSLVEQVIPIIDLMARTSAHFARLRDFIKLEFPPGFPVKIEIPLFHVLN
ARITFGNVNGCSTAEESVSQNVEGTQADSASHITNFEVDQSVFEIPESYYVQDNGRNVHLQDEDYEIMQF
AIQQSLLESSRSQELSGPASNGGISQTNTYDAQYERAIQESLLTSTEGLCPSALSETSRFDNDLQLAMEL
SAKELEEWELRLQEEEAELQQVLQLSLTDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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