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Report for CCDS33859.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33859.1 Public Homo sapiens 3 BFSP2 24 110 108 CCDS HistoryNCBI Gene:8419Re-query CCDS DB by CCDS ID:33859.1Re-query CCDS DB by GeneID:8419See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33859.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302334.3 ENSP00000304987.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302334.3Link to Ensembl Protein Viewer:ENSP00000304987.2Re-query CCDS DB by Nucleotide ID:ENST00000302334Re-query CCDS DB by Protein ID:ENSP00000304987
Original member Current member NCBI NM_003571.4 NP_003562.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003571.4Link to Protein Sequence:NP_003562.1Re-query CCDS DB by Nucleotide ID:NM_003571Re-query CCDS DB by Protein ID:NP_003562Link to BLAST:NP_003562.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003562.1 415 Q13515 415 100% 0 0

Chromosomal Locations for CCDS 33859.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 133400084 133400572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133447317 133447399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133448489 133448645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133450303 133450464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133466828 133466959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133472345 133472565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 133474969 133474972 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1248 nt):
ATGAGTGAGAGGCGAGTGGTAGTGGACTTGCCCACCAGTGCCAGCTCCAGCATGCCCCTCCAGAGGCGCA
GGGCGTCCTTCAGGGGGCCACGGTCATCATCCTCCCTGGAGAGCCCCCCAGCCTCCAGGACCAATGCCAT
GAGTGGCCTTGTCCGAGCACCCGGGGTCTATGTAGGAACAGCACCCAGTGGGTGCATAGGTGGCTTGGGT
GCCCGTGTGACCCGCCGGGCCCTCGGCATCAGCAGTGTCTTCCTTCAGGGCCTGCGGAGCTCAGGCCTGG
CCACCGTGCCGGCTCCAGGTTTGGAGAGGGACCATGGTGCTGTTGAGGACCTAGGGGGCTGCCTGGTGGA
ATATATGGCCAAAGTGCACGCCCTTGAGCAAGTCAGTCAGGAGCTGGAAACACAACTGCGGATGCACCTG
GAGAGCAAAGCCACACGCTCGGGAAACTGGGGTGCCCTACGGGCTTCCTGGGCCAGCAGCTGCCAGCAGG
TGGGTGAGGCAGTCTTGGAAAATGCCCGGCTCATGCTGCAGACAGAAACTATCCAGGCCGGAGCAGATGA
CTTTAAAGAGAGATATGAAAATGAGCAGCCATTTCGAAAGGCGGCAGAAGAGGAAATTAACTCTCTGTAT
AAAGTCATTGATGAGGCTAATTTGACTAAAATGGACCTGGAGAGTCAAATAGAAAGTCTGAAAGAAGAAC
TTGGCTCTCTATCAAGAAACTATGAAGAGGATGTGAAGCTGCTGCACAAACAGTTGGCAGGGTGTGAGCT
GGAACAAATGGATGCTCCCATTGGCACTGGTCTGGACGACATCCTTGAGACGATCAGAATTCAGTGGGAG
AGAGATGTTGAAAAGAACCGGGTGGAGGCAGGAGCCCTGCTCCAAGCTAAGCAACAGGCGGAGGTGGCCC
ACATGTCCCAGACCCAGGAGGAGAAGCTGGCAGCTGCCCTCAGGGTGGAGTTACACAACACTTCGTGCCA
AGTCCAGAGCCTCCAGGCTGAGACAGAATCCTTACGTGCCCTGAAACGAGGCCTGGAGAACACCTTGCAC
GATGCCAAGCACTGGCATGACATGGAGCTCCAGAACCTGGGCGCTGTGGTCGGCCGGCTGGAGGCGGAGC
TCAGGGAAATCCGAGCGGAGGCGGAGCAGCAGCAACAGGAGCGCGCGCATCTGCTGGCCCGCAAGTGCCA
GCTGCAGAAGGACGTGGCGTCCTACCACGCCCTGCTGGACAGGGAGGAGAGCGGCTGA

Translation (415 aa):
MSERRVVVDLPTSASSSMPLQRRRASFRGPRSSSSLESPPASRTNAMSGLVRAPGVYVGTAPSGCIGGLG
ARVTRRALGISSVFLQGLRSSGLATVPAPGLERDHGAVEDLGGCLVEYMAKVHALEQVSQELETQLRMHL
ESKATRSGNWGALRASWASSCQQVGEAVLENARLMLQTETIQAGADDFKERYENEQPFRKAAEEEINSLY
KVIDEANLTKMDLESQIESLKEELGSLSRNYEEDVKLLHKQLAGCELEQMDAPIGTGLDDILETIRIQWE
RDVEKNRVEAGALLQAKQQAEVAHMSQTQEEKLAAALRVELHNTSCQVQSLQAETESLRALKRGLENTLH
DAKHWHDMELQNLGAVVGRLEAELREIRAEAEQQQQERAHLLARKCQLQKDVASYHALLDREESG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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