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Report for CCDS2696.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2696.1 Public Homo sapiens 3 CCK 24 110 108 CCDS HistoryNCBI Gene:885Re-query CCDS DB by CCDS ID:2696.1Re-query CCDS DB by GeneID:885See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2696.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334681.9 ENSP00000335657.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000334681.9Link to Ensembl Protein Viewer:ENSP00000335657.5Re-query CCDS DB by Nucleotide ID:ENST00000334681Re-query CCDS DB by Protein ID:ENSP00000335657
Original member Current member EBI ENST00000396169.7 ENSP00000379472.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396169.7Link to Ensembl Protein Viewer:ENSP00000379472.2Re-query CCDS DB by Nucleotide ID:ENST00000396169Re-query CCDS DB by Protein ID:ENSP00000379472
Original member Current member EBI ENST00000434608.1 ENSP00000409124.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000434608.1Link to Ensembl Protein Viewer:ENSP00000409124.1Re-query CCDS DB by Nucleotide ID:ENST00000434608Re-query CCDS DB by Protein ID:ENSP00000409124
Original member Current member NCBI NM_000729.6 NP_000720.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000729.6Link to Protein Sequence:NP_000720.1Re-query CCDS DB by Nucleotide ID:NM_000729Re-query CCDS DB by Protein ID:NP_000720Link to BLAST:NP_000720.1
Original member Current member NCBI NM_001174138.3 NP_001167609.1 Accepted alive Link to Nucleotide Sequence:NM_001174138.3Link to Protein Sequence:NP_001167609.1Re-query CCDS DB by Nucleotide ID:NM_001174138Re-query CCDS DB by Protein ID:NP_001167609Link to BLAST:NP_001167609.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000720.1 115 P06307 115 100% 0 0
NP_001167609.1 115 P06307 115 100% 0 0

Chromosomal Locations for CCDS 2696.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 42258098 42258231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 42263417 42263630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (348 nt):
ATGAACAGCGGCGTGTGCCTGTGCGTGCTGATGGCGGTACTGGCGGCTGGCGCCCTGACGCAGCCGGTGC
CTCCCGCAGATCCCGCGGGCTCCGGGCTGCAGCGGGCAGAGGAGGCGCCCCGTAGGCAGCTGAGGGTATC
GCAGAGAACGGATGGCGAGTCCCGAGCGCACCTGGGCGCCCTGCTGGCAAGATACATCCAGCAGGCCCGG
AAAGCTCCTTCTGGACGAATGTCCATCGTTAAGAACCTGCAGAACCTGGACCCCAGCCACAGGATAAGTG
ACCGGGACTACATGGGCTGGATGGATTTTGGCCGTCGCAGTGCCGAGGAGTATGAGTACCCCTCCTAG

Translation (115 aa):
MNSGVCLCVLMAVLAAGALTQPVPPADPAGSGLQRAEEAPRRQLRVSQRTDGESRAHLGALLARYIQQAR
KAPSGRMSIVKNLQNLDPSHRISDRDYMGWMDFGRRSAEEYEYPS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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