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Report for CCDS22244.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22244.1 Public Mus musculus 8 Eri1 23 108 98 CCDS HistoryNCBI Gene:67276Re-query CCDS DB by CCDS ID:22244.1Re-query CCDS DB by GeneID:67276See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22244.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033927.7 ENSMUSP00000033927.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033927.7Link to Ensembl Protein Viewer:ENSMUSP00000033927.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000033927Re-query CCDS DB by Protein ID:ENSMUSP00000033927
Original member Current member NCBI NM_026067.3 NP_080343.4 Accepted alive Link to Nucleotide Sequence:NM_026067.3Link to Protein Sequence:NP_080343.4Re-query CCDS DB by Nucleotide ID:NM_026067Re-query CCDS DB by Protein ID:NP_080343Link to BLAST:NP_080343.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080343.4 345 Q7TMF2 345 99.4203% 0 2

Chromosomal Locations for CCDS 22244.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 35469128 35469370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35474397 35474511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35476459 35476568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35478560 35478643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35482516 35482726 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35491201 35491379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 35495272 35495367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1038 nt):
ATGGAGGACGAGCGGGGCCGGGAGCGTGGCGGCGACGCGGCGCAGCAGAAGACGCCGCGGCCGGAGTGTG
AGGAGTCCCGGCCGCTGAGCGTGGAGAAAAAGCAGCGATGCAGACTTGATGGCAAAGAGACAGATGGATC
GAAGTTCATTTCCTCCAATGGCAGTGACTTCAGTGACCCGGTTTACAAAGAGATCGCAATGACAAACGGT
TGTATCAACCGGATGAGTAAGGAGGAACTCAGAGCTAAACTTTCAGAATTTAAGCTTGAAACAAGAGGAG
TCAAGGATGTTCTAAAGAAGAGACTGAAAAACTATTACAAGAAGCAGAAGTTGATGCTGAAAGAGAGCTC
CGCTGGGGACAGTTACTATGACTACATTTGTATCATTGACTTTGAGGCTACTTGTGAAGAGGGGAACCCA
GCTGAGTTCCTACATGAAATCATTGAGTTTCCTGTTGTCCTGTTGAATACACACACCTTAGAAATCGAAG
ATACGTTTCAGCAGTATGTGAGGCCAGAAGTCAATGATCAGCTTTCAGAGTTCTGCATCGGTCTTACTGG
AATCACTCAGGATCAGGTAGACAGAGCCGATGCTTTCCCTCAGGTCCTGAAAAAAGTGATTGAGTGGATG
AAGTCAAAGGAGTTGGGAACTAAGTACAAGTACTGTATACTAACAGATGGCTCCTGGGATATGAGTAAGT
TCCTGAGCATCCAGTGCCGGCTCAGCAGACTCAAACACCCGGCCTTCGCTAAGAAGTGGATCAATATCCG
GAAGTCATACGGAAACTTCTATAAGGTTCCCAGAAGCCAGACCAAACTAACAATAATGCTTGAAAAATTA
GGAATGGATTATGATGGACGGCCTCACAGCGGTCTCGATGACTCTAAGAACATTGCTAGAATAGCTATTC
GGATGCTTCAGGATGGATGTGAACTTCGAATCAATGAAAAAATACTTGGAGGGCAGTTGATGAGTGTGTC
CTCATCCTTACCAGTAGAGGGCGCTCCAGCTCCACAGATGCCACATAGTAGAAAGTAA

Translation (345 aa):
MEDERGRERGGDAAQQKTPRPECEESRPLSVEKKQRCRLDGKETDGSKFISSNGSDFSDPVYKEIAMTNG
CINRMSKEELRAKLSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESSAGDSYYDYICIIDFEATCEEGNP
AEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNDQLSEFCIGLTGITQDQVDRADAFPQVLKKVIEWM
KSKELGTKYKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQTKLTIMLEKL
GMDYDGRPHSGLDDSKNIARIAIRMLQDGCELRINEKILGGQLMSVSSSLPVEGAPAPQMPHSRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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