NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21201.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21201.1 Public Mus musculus 7 Klk1b5 23 108 98 CCDS HistoryNCBI Gene:16622Re-query CCDS DB by CCDS ID:21201.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21201.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074359.3 ENSMUSP00000073964.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074359.3Link to Ensembl Protein Viewer:ENSMUSP00000073964.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000074359Re-query CCDS DB by Protein ID:ENSMUSP00000073964
Original member Current member NCBI NM_008456.4 NP_032482.1 Accepted alive Link to Nucleotide Sequence:NM_008456.4Link to Protein Sequence:NP_032482.1Re-query CCDS DB by Nucleotide ID:NM_008456Re-query CCDS DB by Protein ID:NP_032482Link to BLAST:NP_032482.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032482.1 261 P15945 261 100% 0 0

Chromosomal Locations for CCDS 21201.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 44216501 44216546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44218452 44218611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44219610 44219896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44219991 44220127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 44220499 44220654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (786 nt):
ATGTGGTTCCTGATCCTGTTCCTAGCCCTGTCCCTAGGAGGGATTGATGCTGCACCTCCTGTCCAGTCTC
GAATTTTTGGAGGATTTAACTGTGAGAAGAACTCCCAACCCTGGCAAGTGGCTGTGTACCGCTTCACCAA
ATATCAATGCGGGGGAGTCCTGCTGAACGCCAACTGGGTTCTCACTGCTGCCCACTGCCATAATGACAAG
TACCAGGTTTGGCTGGGCAAAAACAACTTTTTTGAGGATGAACCCTCTGCCCAACACCGGCTTGTCAGCA
AAGCCATCCCTCACCCTGACTTCAACATGAGCCTCCTGAATGAGCACACCCCACAACCTGAGGACGACTA
CAGCAATGACCTGATGCTGCTCCGCCTCAAAAAGCCTGCTGACATCACAGATGTTGTGAAGCCCATCGAC
CTGCCCACTGAGGAGCCCAAGCTGGGGAGCACATGCCTAGCCTCAGGCTGGGGCAGCATTACACCCGTCA
TATACGAACCCGCAGATGATCTCCAGTGTGTGAACTTCAAGCTCCTGCCTAATGAGGACTGTGTCAAAGC
CCACATAGAGAAGGTGACAGATGTTATGTTGTGTGCAGGAGATATGGATGGAGGCAAAGACACTTGTATG
GGTGACTCAGGAGGCCCACTGATCTGTGATGGTGTTCTCCACGGTATCACATCATGGGGCCCTAGCCCTT
GCGGTAAACCCAATGTGCCAGGTATCTACACCAAACTTATTAAGTTTAACTCTTGGATAAAAGACACTAT
AGCTAAAAATGCCTGA

Translation (261 aa):
MWFLILFLALSLGGIDAAPPVQSRIFGGFNCEKNSQPWQVAVYRFTKYQCGGVLLNANWVLTAAHCHNDK
YQVWLGKNNFFEDEPSAQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLKKPADITDVVKPID
LPTEEPKLGSTCLASGWGSITPVIYEPADDLQCVNFKLLPNEDCVKAHIEKVTDVMLCAGDMDGGKDTCM
GDSGGPLICDGVLHGITSWGPSPCGKPNVPGIYTKLIKFNSWIKDTIAKNA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH