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Report for CCDS62781.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
62781.1 Public Homo sapiens 19 ZNF468 24 110 108 CCDS HistoryNCBI Gene:90333Re-query CCDS DB by CCDS ID:62781.1Re-query CCDS DB by GeneID:90333See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 62781.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000243639.8 ENSP00000243639.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000243639.8Link to Ensembl Protein Viewer:ENSP00000243639.4Re-query CCDS DB by Nucleotide ID:ENST00000243639Re-query CCDS DB by Protein ID:ENSP00000243639
Original member Current member NCBI NM_001277120.2 NP_001264049.1 Accepted alive Link to Nucleotide Sequence:NM_001277120.2Link to Protein Sequence:NP_001264049.1Re-query CCDS DB by Nucleotide ID:NM_001277120Re-query CCDS DB by Protein ID:NP_001264049Link to BLAST:NP_001264049.1

Chromosomal Locations for CCDS 62781.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 52842028 52842151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52845179 52845296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52849087 52849213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 52854258 52854272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGGCTCTTCCTCAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAAT
GCCTGGACCCTGCTCAGAGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCT
GGAGTTTTGGTCTGTCATCCCGGCTAAAGTACAGTGGTGTCATCTCCGCTCACTGCAACCTCCACTTCCC
AGGTTCAAGCAATTCTCCTGCCTCAGCCTTCCAAGTACCTGGGACTACAGATATCTCTTCCAAATGCATG
TTGAAGACGTTGTCGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCACAGACAAG
CAAGTCATCACATTGGAGAATTTTGTTTCCATGA

Translation (127 aa):
MALPQGLLTFRDVAIEFSQEEWKCLDPAQRTLYRDVMLENYRNLVSLEFWSVIPAKVQWCHLRSLQPPLP
RFKQFSCLSLPSTWDYRYLFQMHVEDVVVNRARQYRSDPHRDIAQTSKSSHWRILFP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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