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Report for CCDS33339.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33339.2 Public Homo sapiens 2 ZNF385B 24 110 108 CCDS HistoryNCBI Gene:151126Re-query CCDS DB by CCDS ID:33339.2Re-query CCDS DB by GeneID:151126See the combined annotation on chromosome 2 in Sequence Viewer

Public Note for CCDS 33339.1
The coding region has been updated to start at an alternate in-frame start codon that is more supported by conservation data.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 33339.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000410066.7 ENSP00000386845.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000410066.7Link to Ensembl Protein Viewer:ENSP00000386845.2Re-query CCDS DB by Nucleotide ID:ENST00000410066Re-query CCDS DB by Protein ID:ENSP00000386845
Original member Current member NCBI NM_001352808.2 NP_001339737.1 Accepted alive Link to Nucleotide Sequence:NM_001352808.2Link to Protein Sequence:NP_001339737.1Re-query CCDS DB by Nucleotide ID:NM_001352808Re-query CCDS DB by Protein ID:NP_001339737Link to BLAST:NP_001339737.1
Original member Current member NCBI NM_152520.6 NP_689733.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152520.6Link to Protein Sequence:NP_689733.4Re-query CCDS DB by Nucleotide ID:NM_152520Re-query CCDS DB by Protein ID:NP_689733Link to BLAST:NP_689733.4

Chromosomal Locations for CCDS 33339.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 179443250 179443468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179444876 179444977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179445550 179445728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179446525 179446770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179483272 179483434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179518528 179518638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179544827 179544969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179769503 179769800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1461 nt):
ATGAGGTACTCCTTAAGCCCTGACAACCATCTTGAAGATGGAATCATGAATATGGCAAATTTTCTACGGG
GCTTTGAAGAAAAGGGGATAAAGAACGACAGGCCTGAGGACCAGTTGAGCAAAGAGAAAAAGAAAATTCT
TTTCTCCTTCTGTGAGGTGTGCAACATCCAGCTGAACTCTGCAGCCCAGGCTCAGGTGCATTCCAACGGC
AAATCCCACCGCAAACGAGTGAAGCAGCTGAGTGATGGGCAGCCCCCACCACCCGCCCAGGCCAGCCCCA
GCAGCAACAGCAGCACAGGCAGTACATGCCACACTACTACCCTTCCTGCTCTTGTGCGCACACCTACCCT
GATGATGCAGCCTTCACTGGATATCAAACCATTTATGTCTTTTCCAGTGGACAGTAGTTCTGCTGTTGGG
CTCTTTCCAAATTTTAACACAATGGATCCTGTGCAAAAAGCGGTTATTAACCATACATTTGGAGTATCCA
TTCCCCCAAAGAAGAAACAAGTTATTTCTTGTAATGTCTGTCAGCTTCGCTTTAACTCAGATAGCCAGGC
CGAGGCCCACTACAAAGGAAGTAAACATGCCAAGAAGGTCAAAGCACTAGACGCAACGAAAAATAAACCC
AAAATGGTTCCTTCCAAGGACAGCGCAAAGGCTAATCCCAGCTGCTCCATCACTCCAATCACAGGCAACA
ACTCTGACAAATCAGAAGATAAAGGGAAGTTAAAAGCCAGCAGTTCCAGTCAGCCATCAAGCTCTGAAAG
TGGCTCATTTCTCCTCAAATCTGGCACAACACCCCTGCCACCTGGAGCAGCCACTTCTCCCTCCAAGAGC
ACAAATGGAGCTCCCGGTACTGTTGTTGAATCAGAAGAAGAAAAAGCCAAAAAATTACTTTATTGTTCAC
TATGCAAAGTGGCTGTGAACTCCCTGTCACAGCTAGAGGCACACAACACAGGATCTAAACACAAGACCAT
GGTTGAAGCTCGTAATGGGGCTGGTCCAATTAAATCCTATCCTAGACCTGGATCAAGATTAAAGATGCAG
AATGGCAGTAAGGGGTCAGGACTACAGAACAAGACATTTCATTGTGAAATCTGTGATGTTCATGTTAATT
CAGAAATTCAACTCAAACAGCACATTTCTAGCCGAAGGCATAAAGATCGAGTTGCAGGGAAACCACTGAA
GCCAAAATACAGCCCTTACAACAAACTCCAGCGGAGCCCGAGTATTCTAGCAGCAAAACTTGCATTCCAG
AAAGATATGATGAAGCCTTTGGCCCCAGCCTTCCTGTCCTCACCTCTCGCAGCGGCGGCAGCCGTGTCCT
CAGCGCTGTCACTCCCACCCCGGCCCTCTGCCTCGCTCTTCCAGGCTCCAGCCATTCCTCCAGCTCTTCT
GAGGCCTGGGCATGGGCCCATCCGCGCCACTCCTGCCTCCATCCTCTTTGCTCCGTACTAA

Translation (486 aa):
MRYSLSPDNHLEDGIMNMANFLRGFEEKGIKNDRPEDQLSKEKKKILFSFCEVCNIQLNSAAQAQVHSNG
KSHRKRVKQLSDGQPPPPAQASPSSNSSTGSTCHTTTLPALVRTPTLMMQPSLDIKPFMSFPVDSSSAVG
LFPNFNTMDPVQKAVINHTFGVSIPPKKKQVISCNVCQLRFNSDSQAEAHYKGSKHAKKVKALDATKNKP
KMVPSKDSAKANPSCSITPITGNNSDKSEDKGKLKASSSSQPSSSESGSFLLKSGTTPLPPGAATSPSKS
TNGAPGTVVESEEEKAKKLLYCSLCKVAVNSLSQLEAHNTGSKHKTMVEARNGAGPIKSYPRPGSRLKMQ
NGSKGSGLQNKTFHCEICDVHVNSEIQLKQHISSRRHKDRVAGKPLKPKYSPYNKLQRSPSILAAKLAFQ
KDMMKPLAPAFLSSPLAAAAAVSSALSLPPRPSASLFQAPAIPPALLRPGHGPIRATPASILFAPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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