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Report for CCDS14353.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14353.1 Public Homo sapiens X RIBC1 24 110 108 CCDS HistoryNCBI Gene:158787Re-query CCDS DB by CCDS ID:14353.1Re-query CCDS DB by GeneID:158787See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14353.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457095.5 ENSP00000402080.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000457095.5Link to Ensembl Protein Viewer:ENSP00000402080.1Re-query CCDS DB by Nucleotide ID:ENST00000457095Re-query CCDS DB by Protein ID:ENSP00000402080
Original member Current member NCBI NM_144968.4 NP_659405.1 Accepted alive Link to Nucleotide Sequence:NM_144968.4Link to Protein Sequence:NP_659405.1Re-query CCDS DB by Nucleotide ID:NM_144968Re-query CCDS DB by Protein ID:NP_659405Link to BLAST:NP_659405.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_659405.1 192 Q8N443-2 192 100% 0 0

Chromosomal Locations for CCDS 14353.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 53426277 53426393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53428003 53428084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 53428283 53428662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (579 nt):
ATGTATAACATAAAACAGTCAACAGATACCAAGGAAGCAGCAGCCATCGAGGCTAGAAGAAATCGAGAAA
AAGAGCGACAAAACCGATTCTTCAATGTGCGGAACCGAGTCATGGGGGTGGATGTCCAGGCCCTGAACAA
CCAGGTGGGAGACCGAAAGCGTCGGGAAGCAGCAGAAAGAAGCAAGGAGGCAGCTTATGGTACCAGCCAG
GTGCAGTATGATGTGGTAGTCCAGATGTTAGAGAAGGAAGAGGCAGATCGAACACGTCAGCTGGCCAAGA
AAGTCCAGGAGTTTCGGGAGCAGAAGCAGCAGCTCAAGAACGGGCGTGAATTTAGTCTTTGGGATCCAGG
CCAAGTCTGGAAGGGGCTTCCAACCTATCTTAGTTACAGTAATACCTATCCTGGTCCAGCCAGCCTGCAG
TACTTCTCTGGGGAAGACCTAGACAGGGACACACGGCTGAGAATGCAGCAGGGGCAGTTCAGGTACAACT
TGGAAAGGCAACAGCAGGAGCAACAGCAAGCCAAGGTTGATGAGAATTATACAGGTAAGCAGCCCGGCCC
TCCAGACTCAGAGACCTGA

Translation (192 aa):
MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQALNNQVGDRKRREAAERSKEAAYGTSQ
VQYDVVVQMLEKEEADRTRQLAKKVQEFREQKQQLKNGREFSLWDPGQVWKGLPTYLSYSNTYPGPASLQ
YFSGEDLDRDTRLRMQQGQFRYNLERQQQEQQQAKVDENYTGKQPGPPDSET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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