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Report for CCDS7332.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7332.1 Public Homo sapiens 10 SEC24C 24 110 108 CCDS HistoryNCBI Gene:9632Re-query CCDS DB by CCDS ID:7332.1Re-query CCDS DB by GeneID:9632See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7332.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000345254.9 ENSP00000321845.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000345254.9Link to Ensembl Protein Viewer:ENSP00000321845.6Re-query CCDS DB by Nucleotide ID:ENST00000345254Re-query CCDS DB by Protein ID:ENSP00000321845
Original member Current member EBI ENST00000339365.2 ENSP00000343405.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000339365.2Link to Ensembl Protein Viewer:ENSP00000343405.2Re-query CCDS DB by Nucleotide ID:ENST00000339365Re-query CCDS DB by Protein ID:ENSP00000343405
Original member Current member NCBI NM_004922.4 NP_004913.2 Accepted alive Link to Nucleotide Sequence:NM_004922.4Link to Protein Sequence:NP_004913.2Re-query CCDS DB by Nucleotide ID:NM_004922Re-query CCDS DB by Protein ID:NP_004913Link to BLAST:NP_004913.2
Original member Current member NCBI NM_198597.3 NP_940999.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198597.3Link to Protein Sequence:NP_940999.1Re-query CCDS DB by Nucleotide ID:NM_198597Re-query CCDS DB by Protein ID:NP_940999Link to BLAST:NP_940999.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004913.2 1094 P53992-1 1094 100% 0 0
NP_940999.1 1094 P53992-1 1094 100% 0 0

Chromosomal Locations for CCDS 7332.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 73746833 73747004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73751108 73751243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73759622 73759794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73760018 73760386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73760713 73760849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73763490 73763601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73763856 73763983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73765451 73765589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73765800 73765915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73766086 73766210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73766350 73766541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73766760 73766853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73767054 73767170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73767837 73768007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73768810 73768906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73769007 73769152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73769347 73769485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73769615 73769733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73769836 73770015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73770280 73770471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73770709 73770798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 73770955 73771095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3285 nt):
ATGAACGTCAACCAGTCAGTTCCACCTGTGCCACCATTTGGGCAGCCCCAGCCCATCTACCCAGGGTATC
ATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCTACAATGGCCC
AGTACCAGGCTATCAGCAAACACCTCCCCAAGGTATGTCAAGAGCCCCACCTTCCTCGGGGGCACCTCCA
GCCTCAACAGCACAGGCTCCTTGTGGCCAGGCTGCATATGGCCAGTTTGGCCAAGGAGATGTACAGAATG
GGCCAAGCTCCACTGTTCAGATGCAAAGGCTGCCTGGGTCTCAGCCATTTGGGTCCCCATTGGCCCCTGT
GGGCAACCAGCCACCTGTGCTTCAGCCCTATGGCCCTCCCCCGACAAGTGCACAGGTGGCTACGCAGCTG
TCTGGAATGCAGATCAGCGGTGCTGTGGCCCCAGCCCCTCCTTCTTCAGGGCTGGGCTTTGGCCCACCAA
CATCGCTGGCTTCAGCCTCAGGAAGTTTCCCTAACTCTGGTCTGTATGGCTCCTATCCTCAGGGCCAGGC
TCCTCCCCTTAGCCAGGCCCAAGGTCATCCTGGGATCCAGACTCCCCAGCGATCTGCCCCATCACAGGCC
TCCAGCTTCACACCCCCAGCTTCAGGGGGTCCTCGGCTGCCTTCGATGACTGGTCCACTCCTGCCTGGAC
AGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGG
CACCCAGATGACTGGGCCCCTGGGACCACTGCCACCTATGCACTCCCCGCAGCAGCCAGGCTATCAGCCC
CAACAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAGTCTAATTATGGAGGCCCCTACCCAGCAGCAC
CCACCTTTGGCAGTCAGCCTGGGCCTCCTCAGCCACTGCCTCCTAAGCGCCTGGACCCTGATGCCATCCC
AAGCCCTATTCAGGTCATTGAAGATGACAGGAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGG
GGCCAGGTGCCACCCTTAGTCACTACCAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACA
TCCGATGTACATCCTATAATATCCCTTGCACATCTGACATGGCTAAGCAGGCTCAGGTGCCCCTGGCAGC
AGTCATCAAACCGCTGGCAAGGCTGCCCCCAGAGGAGGCTTCACCGTATGTTGTGGACCATGGGGAATCT
GGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCAGTTCATTGAAGGAGGGAGGC
GTTTCCAGTGCTGTTTTTGCAGCTGTATCAATGATGTTCCCCCCCAGTATTTTCAGCACCTGGATCATAC
CGGCAAACGTGTGGATGCTTATGACCGCCCTGAGCTATCCCTGGGCTCTTATGAATTCTTGGCCACTGTA
GATTACTGCAAGAACAATAAGTTCCCCAGCCCTCCTGCCTTTATCTTCATGATTGACGTCTCCTACAATG
CCATCAGGACTGGTCTTGTTAGGCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGA
GGGTGGGGCAGAAGAGTCAGCAATCCGCGTTGGCTTTGTCACCTACAATAAGGTGCTCCACTTCTATAAT
GTGAAGAGCTCATTGGCCCAGCCACAGATGATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGC
TGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTATCACCAGCTTATTGGATCAGATTCCAGA
AATGTTTGCAGACACAAGGGAAACAGAGACAGTATTTGTACCAGTTATCCAGGCTGGAATGGAGGCTCTG
AAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGA
AACTGAAGAACAGAGATGACAGGAAGCTGATCAATACAGACAAGGAGAAGACTCTGTTCCAGCCTCAGAC
AGGTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGATCTCTTTCTCTTCCCT
AACCAGTATGTGGATGTGGCCACACTCTCTGTTGTGCCCCAGCTCACTGGTGGCTCTGTCTACAAATATG
CTTCCTTTCAGGTGGAGAACGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGT
TGGCTTTGATGCTGTGATGCGGGTCCGGACAAGCACTGGTATCCGTGCTGTAGATTTCTTTGGAGCTTTC
TACATGAGCAACACGACAGATGTGGAGCTGGCTGGGCTAGATGGGGACAAAACAGTGACTGTGGAGTTCA
AGCATGACGATCGGCTCAATGAAGAGAGCGGAGCTCTCCTGCAGTGTGCCCTGCTTTACACCAGCTGTGC
AGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCCTGAACTGCTGCACCCAGCTGGCTGATCTATATCGA
AACTGTGAGACTGACACGCTCATCAACTACATGGCCAAGTTTGCATATCGGGGAGTCCTGAATAGCCCTG
TGAAGGCTGTTCGTGACACGCTCATCACCCAGTGTGCCCAGATCCTGGCCTGTTACAGAAAGAACTGTGC
TAGCCCCTCCTCTGCAGGACAGTTGATCCTTCCTGAGTGCATGAAGCTACTCCCAGTTTACCTGAACTGT
GTGTTGAAGAGTGATGTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAGC
TAGTTACCTCCATGGATGTGACTGAGACCAATGTCTTCTTCTACCCTCGGCTCTTACCTTTGACAAAGTC
TCCCGTTGAGAGTACTACCGAACCACCAGCAGTTCGAGCCTCTGAAGAGCGTCTAAGCAATGGGGATATA
TATTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCAGA
GCCTTTTCAGCGTCTCCTCCTTCAGTCAGATCACCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCC
ACTGTCCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGGCACAGAGATCCCGGTACATGAAGCTTACC
GTGGTGAAACAGGAAGACAAGATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGACAAGAGTCTGAGTG
GGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAA

Translation (1094 aa):
MNVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPP
ASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQL
SGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA
SSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQP
QQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVR
GQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGES
GPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATV
DYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYN
VKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEAL
KAAECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFP
NQYVDVATLSVVPQLTGGSVYKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAF
YMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYR
NCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNC
VLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVESTTEPPAVRASEERLSNGDI
YLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLT
VVKQEDKMEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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