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Report for CCDS44673.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44673.1 Public Homo sapiens 11 PLEKHB1 24 110 108 CCDS HistoryNCBI Gene:58473Re-query CCDS DB by CCDS ID:44673.1Re-query CCDS DB by GeneID:58473See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44673.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398492.8 ENSP00000381505.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398492.8Link to Ensembl Protein Viewer:ENSP00000381505.4Re-query CCDS DB by Nucleotide ID:ENST00000398492Re-query CCDS DB by Protein ID:ENSP00000381505
Original member Current member NCBI NM_001130033.2 NP_001123505.1 Accepted alive Link to Nucleotide Sequence:NM_001130033.2Link to Protein Sequence:NP_001123505.1Re-query CCDS DB by Nucleotide ID:NM_001130033Re-query CCDS DB by Protein ID:NP_001123505Link to BLAST:NP_001123505.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123505.1 208 Q9UF11-2 208 100% 0 0

Chromosomal Locations for CCDS 44673.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 73646609 73646626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73649012 73649087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73650553 73650705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73651788 73651890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73652975 73653014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73660753 73660852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73661466 73661602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (627 nt):
ATGAGCCCTGCAGCCCCGGTCCCGCCTGACTCCGCTCTGGAAAGTCCTTTTGAAGAAATGGCCCTGGTGA
GGGGCGGCTGGCTGTGGAGACAGAGCTCCATCCTCCGCCGCTGGAAGCGGAACTGGTTTGCCCTGTGGCT
GGACGGGACCCTGGGATACTACCACGATGAGACAGCGCAGGACGAGGAGGACCGTGTGCTCATCCACTTC
AATGTCCGTGACATAAAGATCGGCCCAGAGTGCCATGATGTGCAGCCCCCAGAGGGCCGGAGCCGAGATG
GCCTGCTGACTGTGAACCTACGGGAAGGCGGCCGCCTGCACCTCTGTGCGGAGACCAAGGATGATGCCCT
AGCATGGAAGACAGCACTGCTGGAGGCAAACTCCACCCCGGTGCGCGTCTACAGCCCGTACCAAGACTAC
TACGAGGTGGTGCCCCCCAATGCACACGAGGCCACGTATGTCCGCAGCTACTACGGACCGCCCTACGCAG
GCCCTGGCGTGACGCACGTGATAGTGCGGGAGGATCCCTGCTACAGCGCCGGCGCCCCTCTGGCCATGGG
CATGCTTGCGGGAGCCGCCACTGGGGCGGCGCTGGGCTCGCTCATGTGGTCGCCCTGCTGGTTCTGA

Translation (208 aa):
MSPAAPVPPDSALESPFEEMALVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVLIHF
NVRDIKIGPECHDVQPPEGRSRDGLLTVNLREGGRLHLCAETKDDALAWKTALLEANSTPVRVYSPYQDY
YEVVPPNAHEATYVRSYYGPPYAGPGVTHVIVREDPCYSAGAPLAMGMLAGAATGAALGSLMWSPCWF


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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