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Report for CCDS55385.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55385.1 Public Homo sapiens X MAP7D2 24 110 108 CCDS HistoryNCBI Gene:256714Re-query CCDS DB by CCDS ID:55385.1Re-query CCDS DB by GeneID:256714See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55385.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000443379.7 ENSP00000388239.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000443379.7Link to Ensembl Protein Viewer:ENSP00000388239.3Re-query CCDS DB by Nucleotide ID:ENST00000443379Re-query CCDS DB by Protein ID:ENSP00000388239
Original member Current member NCBI NM_001168466.2 NP_001161938.1 Accepted alive Link to Nucleotide Sequence:NM_001168466.2Link to Protein Sequence:NP_001161938.1Re-query CCDS DB by Nucleotide ID:NM_001168466Re-query CCDS DB by Protein ID:NP_001161938Link to BLAST:NP_001161938.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161938.1 687 Q96T17-4 687 100% 0 0

Chromosomal Locations for CCDS 55385.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 20010803 20011052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20012349 20012535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20013054 20013132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20013569 20013625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20015223 20015327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20016094 20016325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20024951 20025083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20025681 20025952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20042502 20042629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20044364 20044500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20056680 20056791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20063414 20063577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20064728 20064805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20116750 20116879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2064 nt):
ATGGAGCGCGGCGGCGGCGGCTCCGGGACGGGATCCCGGCCTGAGGGGACTGCGCGGGGAACCTCTCTCC
CAGGGAAGATCGCAGAACCGGGCGCGGTGCGGACCTCTCAGCCCAACTACCGGCCTCAAGGCATGGAGGG
ATTTTTGAAATCAGATGAGAGGCAGAGATTGGCCAAAGAAAGACGAGAAGAAAGAGAAAAATGTCTGGCT
GCTCGGGAGCAACAGATCCTGGAGAAACAGAAAAGAGCCAGGCTGCAGTACGAAAAGCAAATGGAGGAGC
GATGGCGAAAACTGGAAGAGCAGCGGCAGCGGGAGGACCAAAAGAGAGCTGCTGTGGAAGAGAAAAGGAA
ACAGAAGCTCCGGGAGGAGGAGGAACGGCTGGAGGCGATGATGCGCCGGTCCCTGGAGCGCACACAGCAG
CTGGAGCTGAAAAAGAAGTATTCGTGGGGAGCACCACTGGCCATTGGACCCGGAGGACATGATGCTCCTC
TTGGCCCTCTTAACCCTTCTTACAAGTCTTCACCCACTCGAAACATTGAGAAGAAGAAAGCTACATCTAC
GTCTACATCTGGTGCAGGAGATGTTGGGAAAGAAGCCCTTTCAGGAGGAGAGGCCTCTCTGGTGGAGAAG
GTGAAGCGGGGGCAACGAACAGCAACTTCTCTTCCTGTTGTGAACTTCGGGTCCCCTCTGAGAAGATGTG
AGTTTTCTGGAGGCATTCCTAAGAGACCATCTTCTCCTGTGATATCCAAGACAGCTACTAAAGCTTATCC
ACAGTCTCCAAAGACAACGAAACCTCCCTACCCAGGGTCTCCTGTGAAGTACCGCTTACCTGCCCTTTCT
GGCCAAGACATGCCCAAGAGGAAAGCGGAGAAAGAGAAGAGCAACAAGGAAAGGGAAGGTACCTTGGCTC
AGCAGGCTGCTGGCCCGCAAGGAGAGGAAGCCCTAGAGAAGCATGTAGTGGACAAGCATGCCAGCGAGAA
GCATGCTGCTGCCGCAGGAGGGAAAGCCGAAAACAGCGCAGCCTTGGGGAAGCCCACAGCAGGCACCACT
GATGCAGGAGAGGCTGCGAAGATCTTGGCTGAAAAGAGAAGACAGGCCCGGCTGCAGAAGGAACAGGAGG
AGCAAGAACGACTGGAGAAGGAAGAACAAGATAGGCTGGAGAGAGAGGAATTGAAAAGAAAGGCAGAGGA
GGAAAGGCTTCGCCTAGAAGAGGAAGCCCGAAAGCAGGAAGAAGAAAGGAAGCGGCAGGAAGAGGAAAAG
AAAAAACAGGAAGGGGAAGAGAAAAGAAAGGCAGGCGAGGAGGCCAAGCGGAAGGCTGAGGAGGAGCTGT
TGTTGAAAGAAAAGCAAGAACAAGAAAAACAAGAGAAAGCCATGATTGAAAAGCAGAAAGAAGCAGCAGA
AACAAAGGCCCGGGAGGTAGCTGAACAGATGCGTCTCGAGAGAGAACAGATTATGCTGCAGATTGAGCAG
GAGAGACTGGAGAGAAAGAAGAGAATAGATGAAATCATGAAGAGAACAAGGAAAAGTGATGTGTCTCCAC
AAGTGAAGAAAGAAGACCCCAAAGTGGGGGTCCAGCCTGCTGTGTGTGTGGAAAAGAAGACAAAACTGGT
TGTCCCCAACAAAATGGAAATCAATGGATTGAACACCTGCCAGGAAGTTAATGGTGTGGATCACGCTGCC
CCAGAAACTTATCCCCAAGACATTTTCTCTAATGGGCTTAAGCCAGCTGGGGGACTCATTCATCTGGATG
CCCTTGATGGGAAATCAAATAGCCTGGATGATTCAACTGAAGAAGTTCAGTCTATGGATGTGAGTCCTGT
TTCAAAAGAAGAGCTTATCTCTATCCCGGAATTTTCACCAGTGAGTGAAATGATTCCTGGGGTGTCTCTG
GACCAAAATGGAACTGGTAATGCCCGAGCACTTCAAGATCTCTTAGATTTCACTGGTCCCCCGACATTCC
CCAAGAGATCCAGTGAAAATCTCAGCCTGGACGACTGTAACAAAAACCTTATCGAAGGATTTAACAGTCC
TGGCCAAGAAACTCCTCTCAACACCTTCTGTTGA

Translation (687 aa):
MERGGGGSGTGSRPEGTARGTSLPGKIAEPGAVRTSQPNYRPQGMEGFLKSDERQRLAKERREEREKCLA
AREQQILEKQKRARLQYEKQMEERWRKLEEQRQREDQKRAAVEEKRKQKLREEEERLEAMMRRSLERTQQ
LELKKKYSWGAPLAIGPGGHDAPLGPLNPSYKSSPTRNIEKKKATSTSTSGAGDVGKEALSGGEASLVEK
VKRGQRTATSLPVVNFGSPLRRCEFSGGIPKRPSSPVISKTATKAYPQSPKTTKPPYPGSPVKYRLPALS
GQDMPKRKAEKEKSNKEREGTLAQQAAGPQGEEALEKHVVDKHASEKHAAAAGGKAENSAALGKPTAGTT
DAGEAAKILAEKRRQARLQKEQEEQERLEKEEQDRLEREELKRKAEEERLRLEEEARKQEEERKRQEEEK
KKQEGEEKRKAGEEAKRKAEEELLLKEKQEQEKQEKAMIEKQKEAAETKAREVAEQMRLEREQIMLQIEQ
ERLERKKRIDEIMKRTRKSDVSPQVKKEDPKVGVQPAVCVEKKTKLVVPNKMEINGLNTCQEVNGVDHAA
PETYPQDIFSNGLKPAGGLIHLDALDGKSNSLDDSTEEVQSMDVSPVSKEELISIPEFSPVSEMIPGVSL
DQNGTGNARALQDLLDFTGPPTFPKRSSENLSLDDCNKNLIEGFNSPGQETPLNTFC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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