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Report for CCDS59479.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59479.1 Public Homo sapiens 4 EPGN 24 110 108 CCDS HistoryNCBI Gene:255324Re-query CCDS DB by CCDS ID:59479.1Re-query CCDS DB by GeneID:255324See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59479.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000502358.5 ENSP00000426678.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000502358.5Link to Ensembl Protein Viewer:ENSP00000426678.1Re-query CCDS DB by Nucleotide ID:ENST00000502358Re-query CCDS DB by Protein ID:ENSP00000426678
Original member Current member NCBI NM_001270992.2 NP_001257921.1 Accepted alive Link to Nucleotide Sequence:NM_001270992.2Link to Protein Sequence:NP_001257921.1Re-query CCDS DB by Nucleotide ID:NM_001270992Re-query CCDS DB by Protein ID:NP_001257921Link to BLAST:NP_001257921.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257921.1 103 Q6UW88-4 103 100% 0 0

Chromosomal Locations for CCDS 59479.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 74308534 74308576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 74309093 74309182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 74312185 74312305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 74314580 74314637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGGCTTTGGGAGTTCCAATATCAGTCTATCTTTTATTCAACGCAATGACAGCACTGACCGAAGAGGCAG
CCGTGACTGTAACACCTCCAATCACAGCCCAGCAAGGTAACTGGACAGTTAACAAAACAGAAGCTGACAA
CATAGAAGGACCCATAGCCTTGAAGTTCTCACACCTTTGCCTGGAAGATCATAACAGTTACTGCATCAAC
GGTGCTTGTGCATTCCACCATGAGCTAGAGAAAGCCATCTGCAGGTGTCTAAAATTGAAATCGCCTTACA
ATGTCTGTTCTGGAGAAAGACGACCACTGTGA

Translation (103 aa):
MALGVPISVYLLFNAMTALTEEAAVTVTPPITAQQGNWTVNKTEADNIEGPIALKFSHLCLEDHNSYCIN
GACAFHHELEKAICRCLKLKSPYNVCSGERRPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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