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Report for CCDS65727.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65727.1 Public Homo sapiens 1 SUCO 24 110 108 CCDS HistoryNCBI Gene:51430Re-query CCDS DB by CCDS ID:65727.1Re-query CCDS DB by GeneID:51430See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65727.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000610051.5 ENSP00000476704.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000610051.5Link to Ensembl Protein Viewer:ENSP00000476704.1Re-query CCDS DB by Nucleotide ID:ENST00000610051Re-query CCDS DB by Protein ID:ENSP00000476704
Original member Current member NCBI NM_001282750.2 NP_001269679.1 Accepted alive Link to Nucleotide Sequence:NM_001282750.2Link to Protein Sequence:NP_001269679.1Re-query CCDS DB by Nucleotide ID:NM_001282750Re-query CCDS DB by Protein ID:NP_001269679Link to BLAST:NP_001269679.1

Chromosomal Locations for CCDS 65727.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 172533436 172533497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172551512 172551626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172555869 172556023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172557280 172557417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172557644 172557794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172569019 172569142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172570047 172570171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172570663 172570730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172573891 172573998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172575518 172575623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172577539 172577559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172577764 172577819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172578298 172578389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172579202 172579267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172585018 172585086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172585858 172585948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172588760 172588924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172590984 172591071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172600064 172600168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602064 172602218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602696 172602787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172608747 172608802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172609816 172610259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2652 nt):
ATGAAGAAGCACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCTTTCTGTGCTCTCTGGTCTGGCTTCCCA
GCTGGCGTGTATGTTGTAAAGAGAGTTCTTCAGCTTCAGCGTCATCATATTACTCTCAAGATGACAACTG
CGCACTAGAAAATGAAGATGTACAATTCCAGAAAAAGAATACAGAGTCAAAAAAGTTAAGTCCACCGGTG
GTGGAGACACTCCCTACAGTTGATTTGCATGAAGAGTCTTCCAATGCAGTTGTGGACAGTGAAACTGTTG
AAAATATTTCCAGCTCATCTACCTCAGAAATCACTCCAATCTCAAAGCTTGATGAAATAGAAAAATCTGG
TACTATTCCGATAGCCAAACCAAGTGAAACTGAGCAGTCTGAAACTGATTGTGATGTTGGTGAGGCCCTT
GATGCTAGTGCTCCAATTGAACAACCTTCCTTTGTCAGTCCACCTGACAGCCTTGTTGGCCAGCATATAG
AAAATGTATCATCTTCACATGGTAAAGGAAAGATAACAAAATCAGAATTTGAATCAAAAGTTTCAGCAAG
TGAACAGGGCGGTGGTGATCCAAAATCTGCATTGAATGCTTCAGATAATTTAAAAAATGAGAGCTCTGAT
TATACAAAACCAGGAGACATTGACCCTACATCAGTAGCAAGTCCCAAAGATCCAGAAGATATACCAACAT
TTGATGAATGGAAGAAGAAAGTTATGGAAGTAGAAAAAGAAAAAAGTCAGTCGATGCATGCATCTTCTAA
TGGAGGTTCACATGCCACCAAAAAGGTCCAGAAAAATCGAAATAATTATGCCTCAGTAGAATGTGGTGCC
AAAATTCTAGCAGCTAATCCAGAAGCCAAGAGCACATCTGCTATTCTTATAGAAAATATGGATCTTTACA
TGTTGAATCCTTGCAGCACTAAAATTTGGTTTGTTATTGAACTTTGTGAACCAATTCAAGTAAAACAGCT
TGATATTGCAAATTATGAATTATTTTCTTCTACTCCTAAAGATTTTCTGGTTTCTATCAGTGACAGATAT
CCAACAAATAAGTGGATTAAGCTGGGTACTTTTCATGGTAGAGATGAGCGGAATGTACAGAGTTTCCCTT
TAGATGAACAGATGTATGCAAAATATGTCAAGATGTTCATCAAGTACATAAAGGTTGAGTTGCTATCACA
TTTTGGATCAGAGCACTTTTGTCCATTAAGCCTTATAAGGGTATTTGGCACTAGCATGGTGGAAGAATAT
GAAGAAATTGCTGATTCCCAGTATCACTCAGAACGCCAGGAACTATTTGATGAGGACTATGATTATCCAC
TGGATTATAATACTGGAGAGGATAAATCCTCAAAAAATCTTCTTGGTTCTGCTACAAATGCCATTCTAAA
TATGGTGAATATTGCTGCTAATATTCTGGGAGCAAAAACTGAAGACCTGACAGAAGGAAATAAAAGTATA
TCTGAGAATGCCACTGCCACAGCTGCACCTAAAATGCCTGAATCAACTCCTGTTTCAACTCCTGTTCCAT
CTCCTGAGTATGTAACCACTGAAGTACACACACATGACATGGAGCCGTCAACACCAGATACTCCAAAAGA
GAGTCCCATTGTACAGTTAGTTCAAGAGGAGGAAGAGGAGGCAAGTCCATCTACAGTGACCCTTCTGGGC
AGCGGTGAACAGGAAGATGAATCATCACCCTGGTACCGAAAACAAATGGAAGAAATGCAAAAGGCTTTCA
ATAAAACAATCGTGAAACTTCAGAATACTTCAAGAATAGCAGAGGAGCAGGATCAGCGGCAAACTGAAGC
CATCCAGTTGCTACAGGCACAGCTGACCAACATGACACAGCTTGTTTCAAATTTATCAGCAACAGTAGCA
GAATTGAAACGGGAGGTTTCAGATCGACAAAGCTATCTTGTCATATCTTTGGTTCTTTGTGTTGTCTTGG
GACTGATGCTTTGTATGCAGCGTTGTCGAAATACTTCTCAATTTGATGGAGATTATATTTCAAAACTTCC
TAAAAGTAATCAGTATCCAAGCCCTAAAAGGTGTTTCTCTTCCTATGATGATATGAATTTGAAAAGAAGA
ACTTCATTCCCACTCATGAGATCCAAGTCTCTACAGTTAACTGGCAAAGAAGTAGACCCAAATGATTTGT
ACATTGTAGAACCCCTCAAGTTTTCTCCAGAAAAGAAGAAGAAGCGCTGCAAGTACAAAATTGAAAAAAT
TGAGACCATAAAGCCTGAAGAACCATTGCACCCCATAGCCAATGGCGACATAAAAGGAAGAAAGCCCTTT
ACGAACCAGAGAGATTTTTCTAATATGGGAGAAGTTTATCACTCTTCTTATAAAGGTCCTCCATCTGAAG
GAAGCTCAGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCAGCTTGCACAAGTCTGTG
CAATGGACAGTCTCAAAAGACAAAAACTGAGAAGAGGGCTTTAAAACGAAGACGATCTAAAGTCCAAGAC
CAAGGAAAATTGATAAAAACTCTAATACAGACTAAGTCGGGATCATTGCCGAGCCTGCATGACATAATCA
AAGGAAACAAAGAGATCACCGTGGGAACATTTGGTGTTACAGCAGTCTCGGGACATATCTAA

Translation (883 aa):
MKKHRRALALVSCLFLCSLVWLPSWRVCCKESSSASASSYYSQDDNCALENEDVQFQKKNTESKKLSPPV
VETLPTVDLHEESSNAVVDSETVENISSSSTSEITPISKLDEIEKSGTIPIAKPSETEQSETDCDVGEAL
DASAPIEQPSFVSPPDSLVGQHIENVSSSHGKGKITKSEFESKVSASEQGGGDPKSALNASDNLKNESSD
YTKPGDIDPTSVASPKDPEDIPTFDEWKKKVMEVEKEKSQSMHASSNGGSHATKKVQKNRNNYASVECGA
KILAANPEAKSTSAILIENMDLYMLNPCSTKIWFVIELCEPIQVKQLDIANYELFSSTPKDFLVSISDRY
PTNKWIKLGTFHGRDERNVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRVFGTSMVEEY
EEIADSQYHSERQELFDEDYDYPLDYNTGEDKSSKNLLGSATNAILNMVNIAANILGAKTEDLTEGNKSI
SENATATAAPKMPESTPVSTPVPSPEYVTTEVHTHDMEPSTPDTPKESPIVQLVQEEEEEASPSTVTLLG
SGEQEDESSPWYRKQMEEMQKAFNKTIVKLQNTSRIAEEQDQRQTEAIQLLQAQLTNMTQLVSNLSATVA
ELKREVSDRQSYLVISLVLCVVLGLMLCMQRCRNTSQFDGDYISKLPKSNQYPSPKRCFSSYDDMNLKRR
TSFPLMRSKSLQLTGKEVDPNDLYIVEPLKFSPEKKKKRCKYKIEKIETIKPEEPLHPIANGDIKGRKPF
TNQRDFSNMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQSQKTKTEKRALKRRRSKVQD
QGKLIKTLIQTKSGSLPSLHDIIKGNKEITVGTFGVTAVSGHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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