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Report for CCDS132.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
132.1 Public Homo sapiens 1 FBXO44 24 110 108 CCDS HistoryNCBI Gene:93611Re-query CCDS DB by CCDS ID:132.1Re-query CCDS DB by GeneID:93611See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 132.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000251547.10 ENSP00000251547.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000251547.10Link to Ensembl Protein Viewer:ENSP00000251547.5Re-query CCDS DB by Nucleotide ID:ENST00000251547Re-query CCDS DB by Protein ID:ENSP00000251547
Original member Current member EBI ENST00000376770.5 ENSP00000365961.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376770.5Link to Ensembl Protein Viewer:ENSP00000365961.1Re-query CCDS DB by Nucleotide ID:ENST00000376770Re-query CCDS DB by Protein ID:ENSP00000365961
Original member Current member NCBI NM_001014765.2 NP_001014765.1 Accepted alive Link to Nucleotide Sequence:NM_001014765.2Link to Protein Sequence:NP_001014765.1Re-query CCDS DB by Nucleotide ID:NM_001014765Re-query CCDS DB by Protein ID:NP_001014765Link to BLAST:NP_001014765.1
Original member Current member NCBI NM_001304791.2 NP_001291720.1 Accepted alive Link to Nucleotide Sequence:NM_001304791.2Link to Protein Sequence:NP_001291720.1Re-query CCDS DB by Nucleotide ID:NM_001304791Re-query CCDS DB by Protein ID:NP_001291720Link to BLAST:NP_001291720.1
Original member Current member NCBI NM_033182.7 NP_149438.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033182.7Link to Protein Sequence:NP_149438.2Re-query CCDS DB by Nucleotide ID:NM_033182Re-query CCDS DB by Protein ID:NP_149438Link to BLAST:NP_149438.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001014765.1 255 Q9H4M3-1 255 100% 0 0
NP_001291720.1 255 Q9H4M3-1 255 100% 0 0
NP_149438.2 255 Q9H4M3-1 255 100% 0 0

Chromosomal Locations for CCDS 132.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 11655836 11656100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11658267 11658393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11658533 11658628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11658736 11658871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 11661130 11661273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (768 nt):
ATGGCTGTGGGGAACATCAACGAGCTGCCCGAGAACATCCTGCTGGAGCTGTTCACGCACGTGCCCGCCC
GCCAGCTGCTGCTGAACTGCCGCCTGGTCTGCAGCCTCTGGCGGGACCTCATCGACCTCGTGACCCTCTG
GAAACGCAAGTGCCTGCGAGAGGGCTTCATCACTGAGGACTGGGACCAGCCCGTGGCCGACTGGAAGATC
TTCTACTTCTTACGGAGCCTGCACAGGAACCTCCTGCACAACCCGTGCGCTGAAGAGGGGTTCGAGTTCT
GGAGCCTGGATGTGAATGGAGGCGATGAGTGGAAGGTGGAGGATCTCTCTCGAGACCAGAGGAAGGAATT
CCCCAATGACCAGGTCAAGAAATACTTCGTTACTTCATATTACACCTGCCTCAAGTCCCAGGTGGTGGAC
CTCAAGGCCGAAGGGTATTGGGAGGAGCTGATGGATACCACACGGCCGGACATCGAGGTCAAGGACTGGT
TCGCAGCCAGGCCAGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGCACGCGCC
TCTGGGGACCTTCCAGCCAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTCC
CACACATTCTCCAACTACCCGCCCGGCGTCCGCTACATCTGGTTTCAGCACGGCGGCGTGGACACTCATT
ACTGGGCCGGCTGGTACGGCCCGAGGGTCACCAACAGCAGCATCACCATCGGGCCCCCGCTGCCCTGA

Translation (255 aa):
MAVGNINELPENILLELFTHVPARQLLLNCRLVCSLWRDLIDLVTLWKRKCLREGFITEDWDQPVADWKI
FYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQVKKYFVTSYYTCLKSQVVD
LKAEGYWEELMDTTRPDIEVKDWFAARPDCGSKYQLCVQLLSSAHAPLGTFQPDPATIQQKSDAKWREVS
HTFSNYPPGVRYIWFQHGGVDTHYWAGWYGPRVTNSSITIGPPLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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