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Report for CCDS14747.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14747.1 Public Homo sapiens X DNASE1L1 24 110 108 CCDS HistoryNCBI Gene:1774Re-query CCDS DB by CCDS ID:14747.1Re-query CCDS DB by GeneID:1774See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14747.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000014935.7 ENSP00000014935.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000014935.7Link to Ensembl Protein Viewer:ENSP00000014935.3Re-query CCDS DB by Nucleotide ID:ENST00000014935Re-query CCDS DB by Protein ID:ENSP00000014935
Original member Current member EBI ENST00000309585.9 ENSP00000309168.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000309585.9Link to Ensembl Protein Viewer:ENSP00000309168.5Re-query CCDS DB by Nucleotide ID:ENST00000309585Re-query CCDS DB by Protein ID:ENSP00000309168
Original member Current member EBI ENST00000369807.6 ENSP00000358822.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369807.6Link to Ensembl Protein Viewer:ENSP00000358822.1Re-query CCDS DB by Nucleotide ID:ENST00000369807Re-query CCDS DB by Protein ID:ENSP00000358822
Original member Current member EBI ENST00000369808.7 ENSP00000358823.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369808.7Link to Ensembl Protein Viewer:ENSP00000358823.3Re-query CCDS DB by Nucleotide ID:ENST00000369808Re-query CCDS DB by Protein ID:ENSP00000358823
Original member Current member EBI ENST00000369809.5 ENSP00000358824.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369809.5Link to Ensembl Protein Viewer:ENSP00000358824.1Re-query CCDS DB by Nucleotide ID:ENST00000369809Re-query CCDS DB by Protein ID:ENSP00000358824
Original member Current member EBI ENST00000393638.5 ENSP00000377255.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393638.5Link to Ensembl Protein Viewer:ENSP00000377255.1Re-query CCDS DB by Nucleotide ID:ENST00000393638Re-query CCDS DB by Protein ID:ENSP00000377255
Original member Current member NCBI NM_001009932.3 NP_001009932.1 Accepted alive Link to Nucleotide Sequence:NM_001009932.3Link to Protein Sequence:NP_001009932.1Re-query CCDS DB by Nucleotide ID:NM_001009932Re-query CCDS DB by Protein ID:NP_001009932Link to BLAST:NP_001009932.1
Original member Current member NCBI NM_001009933.3 NP_001009933.1 Accepted alive Link to Nucleotide Sequence:NM_001009933.3Link to Protein Sequence:NP_001009933.1Re-query CCDS DB by Nucleotide ID:NM_001009933Re-query CCDS DB by Protein ID:NP_001009933Link to BLAST:NP_001009933.1
Original member Current member NCBI NM_001009934.3 NP_001009934.1 Accepted alive Link to Nucleotide Sequence:NM_001009934.3Link to Protein Sequence:NP_001009934.1Re-query CCDS DB by Nucleotide ID:NM_001009934Re-query CCDS DB by Protein ID:NP_001009934Link to BLAST:NP_001009934.1
Original member Current member NCBI NM_001303620.2 NP_001290549.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001303620.2Link to Protein Sequence:NP_001290549.1Re-query CCDS DB by Nucleotide ID:NM_001303620Re-query CCDS DB by Protein ID:NP_001290549Link to BLAST:NP_001290549.1
Original member Current member NCBI NM_006730.4 NP_006721.1 Accepted alive Link to Nucleotide Sequence:NM_006730.4Link to Protein Sequence:NP_006721.1Re-query CCDS DB by Nucleotide ID:NM_006730Re-query CCDS DB by Protein ID:NP_006721Link to BLAST:NP_006721.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001009932.1 302 P49184 302 100% 0 0
NP_001009933.1 302 P49184 302 100% 0 0
NP_001009934.1 302 P49184 302 100% 0 0
NP_001290549.1 302 P49184 302 100% 0 0
NP_006721.1 302 P49184 302 100% 0 0

Chromosomal Locations for CCDS 14747.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 154402707 154402841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154402942 154403190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154403269 154403381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154403522 154403622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154404828 154404914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154404995 154405083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 154405434 154405568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGCACTACCCAACTGCACTCCTCTTCCTCATCCTGGCCAATGGGGCCCAGGCCTTTCGCATCTGCGCCT
TCAATGCCCAGCGGCTGACACTGGCCAAGGTGGCCAGGGAGCAGGTGATGGACACCTTAGTTCGGATACT
GGCTCGCTGTGACATCATGGTGCTGCAGGAGGTGGTGGACTCTTCCGGCAGCGCCATCCCGCTCCTGCTT
CGAGAACTCAATCGATTTGATGGCTCTGGGCCCTACAGCACCCTGAGCAGCCCCCAGCTGGGGCGCAGCA
CCTACATGGAGACGTATGTGTACTTCTATCGGTCACACAAAACACAGGTCCTGAGTTCCTACGTGTACAA
CGATGAGGATGACGTCTTTGCCCGGGAGCCATTTGTGGCCCAGTTCTCTTTGCCCAGCAATGTCCTTCCC
AGCCTGGTGTTGGTCCCGCTGCACACCACTCCTAAGGCCGTAGAGAAGGAGCTGAACGCCCTCTACGATG
TGTTTCTGGAGGTCTCCCAGCACTGGCAGAGCAAGGACGTGATCCTGCTTGGGGACTTCAATGCTGACTG
CGCTTCACTGACCAAAAAGCGCCTGGACAAGCTGGAGCTGCGGACTGAGCCAGGCTTCCACTGGGTGATT
GCCGATGGGGAGGACACCACAGTGCGGGCCAGCACCCACTGCACCTATGACCGCGTCGTGCTGCACGGGG
AGCGCTGCCGGAGTCTGCTGCACACTGCGGCTGCCTTTGACTTCCCCACGAGCTTCCAGCTCACCGAGGA
GGAGGCCCTCAACATCAGTGACCACTACCCCGTGGAGGTGGAGCTGAAGCTGAGCCAGGCGCACAGCGTC
CAGCCTCTCAGCCTCACTGTTCTGTTGCTGCTATCACTCCTGTCCCCTCAGCTGTGCCCTGCTGCCTGA

Translation (302 aa):
MHYPTALLFLILANGAQAFRICAFNAQRLTLAKVAREQVMDTLVRILARCDIMVLQEVVDSSGSAIPLLL
RELNRFDGSGPYSTLSSPQLGRSTYMETYVYFYRSHKTQVLSSYVYNDEDDVFAREPFVAQFSLPSNVLP
SLVLVPLHTTPKAVEKELNALYDVFLEVSQHWQSKDVILLGDFNADCASLTKKRLDKLELRTEPGFHWVI
ADGEDTTVRASTHCTYDRVVLHGERCRSLLHTAAAFDFPTSFQLTEEEALNISDHYPVEVELKLSQAHSV
QPLSLTVLLLLSLLSPQLCPAA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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