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Report for CCDS410.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
410.1 Public Homo sapiens 1 OSCP1 24 110 108 CCDS HistoryNCBI Gene:127700Re-query CCDS DB by CCDS ID:410.1Re-query CCDS DB by GeneID:127700See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 410.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354267.3 ENSP00000346216.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354267.3Link to Ensembl Protein Viewer:ENSP00000346216.3Re-query CCDS DB by Nucleotide ID:ENST00000354267Re-query CCDS DB by Protein ID:ENSP00000346216
Original member Current member NCBI NM_206837.3 NP_996668.1 Accepted alive Link to Nucleotide Sequence:NM_206837.3Link to Protein Sequence:NP_996668.1Re-query CCDS DB by Nucleotide ID:NM_206837Re-query CCDS DB by Protein ID:NP_996668Link to BLAST:NP_996668.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996668.1 223 Q8WVF1-4 223 100% 0 0

Chromosomal Locations for CCDS 410.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 36428320 36428475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36431802 36431882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36432422 36432589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36438756 36438910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 36450258 36450369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGTCGGTGCGGACGCTACCGCTGCTCTTCTTGAACTTGGGCGGGGAGATGCTTTACATCCTCGACCAAC
GGCTGCGGGCCCAGAACATCCCGGGAGACAAGGCCCGCAAAGTTCTGAATGACATCATCTCCACCATGTT
CAATAGAAAGTTTATGGAGGAATTATTCAAGCCTCAAGAGCTCTACTCCAAGAAGGCCCTGAGGACTGTC
TATGAGCGCCTGGCTCATGCCTCCATTATGAAACTGAACCAGGCCAGCATGGATAAGCTCTATGACCTGA
TGACCATGGCTTTCAAATATCAAGTATTGCTGTGTCCCCGACCCAAGGATGTGCTGCTGGTCACTTTCAA
TCACTTGGATACCATCAAGGGATTCATCCGAGACTCCCCAACCATCCTGCAGCAAGTGGACGAGACTTTG
CGGCAGCTGACAGAAATATATGGTGGTCTCTCTGCAGGGGAGTTCCAGCTGATCCGGCAGACACTCCTCA
TCTTCTTCCAAGACCTGCACATCCGAAGAGAGTGCTTCTGGAAGCATATGCAAGAAACTGTTCACAGTGC
ACAGTGTTGCCTTCCAGGAGTGGGGAACTATATGGAGGACAGGAGAAGGAGACTGACTTTCCATTATGTA
TACCCTTTTGAGAACTTTGAGTTTTGTACCTGGGCAAAATAA

Translation (223 aa):
MSVRTLPLLFLNLGGEMLYILDQRLRAQNIPGDKARKVLNDIISTMFNRKFMEELFKPQELYSKKALRTV
YERLAHASIMKLNQASMDKLYDLMTMAFKYQVLLCPRPKDVLLVTFNHLDTIKGFIRDSPTILQQVDETL
RQLTEIYGGLSAGEFQLIRQTLLIFFQDLHIRRECFWKHMQETVHSAQCCLPGVGNYMEDRRRRLTFHYV
YPFENFEFCTWAK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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