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Report for CCDS82003.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
82003.1 Public Homo sapiens 16 ZFP90 24 110 108 CCDS HistoryNCBI Gene:146198Re-query CCDS DB by CCDS ID:82003.1Re-query CCDS DB by GeneID:146198See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 82003.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000564323.5 ENSP00000463193.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000564323.5Link to Ensembl Protein Viewer:ENSP00000463193.1Re-query CCDS DB by Nucleotide ID:ENST00000564323Re-query CCDS DB by Protein ID:ENSP00000463193
Original member Current member NCBI NM_001305206.2 NP_001292135.1 Accepted alive Link to Nucleotide Sequence:NM_001305206.2Link to Protein Sequence:NP_001292135.1Re-query CCDS DB by Nucleotide ID:NM_001305206Re-query CCDS DB by Protein ID:NP_001292135Link to BLAST:NP_001292135.1
Original member Current member NCBI NM_001305208.2 NP_001292137.1 Accepted alive Link to Nucleotide Sequence:NM_001305208.2Link to Protein Sequence:NP_001292137.1Re-query CCDS DB by Nucleotide ID:NM_001305208Re-query CCDS DB by Protein ID:NP_001292137Link to BLAST:NP_001292137.1

Chromosomal Locations for CCDS 82003.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 68539793 68539825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68557998 68558124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68558473 68558568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 68562989 68563014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (282 nt):
ATGGCCCCGAGGCCTCCGACCGCCGCGCCCCAGGAATCAGTGACATTCAAAGATGTGTCTGTGGACTTCA
CCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTA
TAGCCACCTGGTTTCTCTTGGATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAA
GAGCCATGGATATCAGAGGGAGAAATCCAACGACCTTTCTATCCAGCAGTGTATTTCAACAGGAAGGAAT
AG

Translation (93 aa):
MAPRPPTAAPQESVTFKDVSVDFTQEEWYHVDPAQRSLYRDVMLENYSHLVSLGYQVSKPEVIFKLEQGE
EPWISEGEIQRPFYPAVYFNRKE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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