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Report for CCDS12638.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12638.1 Public Homo sapiens 19 ZNF285 24 110 108 CCDS HistoryNCBI Gene:26974Re-query CCDS DB by CCDS ID:12638.1Re-query CCDS DB by GeneID:26974See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12638.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544719.6 ENSP00000439431.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544719.6Link to Ensembl Protein Viewer:ENSP00000439431.2Re-query CCDS DB by Nucleotide ID:ENST00000544719Re-query CCDS DB by Protein ID:ENSP00000439431
Original member Current member EBI ENST00000614994.5 ENSP00000483662.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000614994.5Link to Ensembl Protein Viewer:ENSP00000483662.1Re-query CCDS DB by Nucleotide ID:ENST00000614994Re-query CCDS DB by Protein ID:ENSP00000483662
Original member Current member NCBI NM_001291489.2 NP_001278418.1 Accepted alive Link to Nucleotide Sequence:NM_001291489.2Link to Protein Sequence:NP_001278418.1Re-query CCDS DB by Nucleotide ID:NM_001291489Re-query CCDS DB by Protein ID:NP_001278418Link to BLAST:NP_001278418.1
Original member Current member NCBI NM_152354.6 NP_689567.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152354.6Link to Protein Sequence:NP_689567.4Re-query CCDS DB by Nucleotide ID:NM_152354Re-query CCDS DB by Protein ID:NP_689567Link to BLAST:NP_689567.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001278418.1 590 Q96NJ3-1 590 100% 0 0
NP_689567.4 590 Q96NJ3-1 590 100% 0 0

Chromosomal Locations for CCDS 12638.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44386472 44388102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44392340 44392466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44397199 44397213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1773 nt):
ATGATTAAGTTCCAGGAAAGGGTGACATTCAAGGATGTGGCTGTTGTCTTCACCAAGGAAGAGCTGGCAC
TATTGGATAAAGCCCAGATAAACCTGTACCAAGATGTGATGCTGGAAAACTTCAGGAACCTCATGTTAGT
GAGAGACGGGATTAAAAACAACATTTTGAATCTTCAGGCAAAGGGGTTAAGTTACCTTTCGCAAGAAGTG
CTTCATTGCTGGCAGATTTGGAAACAAAGGATCCGGGATTTAACTGTGAGTCAGGATTATATCGTGAACC
TTCAAGAAGAGTGTTCCCCACATTTAGAAGATGTTTCCCTCAGTGAAGAGTGGGCAGGCATTTCTCTTCA
GATTTCTGAAAATGAAAACTATGTAGTAAATGCCATTATCAAAAATCAAGATATCACAGCATGGCAAAGC
CTGACACAGGTTCTTACCCCAGAATCGTGGAGGAAAGCCAACATAATGACCGAGCCCCAGAACTCTCAGG
GAAGATATAAGGGAATTTACATGGAAGAGAAATTGTACAGACGTGCTCAGCATGATGACAGCCTCAGTTG
GACCTCATGTGATCATCATGAGTCCCAAGAATGTAAAGGAGAGGACCCTGGTAGACATCCCAGCTGTGGG
AAAAACTTGGGTATGAAATCAACGGTTGAAAAACGTAATGCGGCCCATGTATTACCACAGCCTTTCCCAT
GTAATAACTGTGGGGTGGCCTTTGCAGATGATACAGATCCTCATGTCCATCACAGCACTCACCTAGGAGA
AAAATCTTATAAATGTGACCAGTATGGAAAGAACTTTAGTCAGAGCCAAGATCTTATCGTTCATTGTAAA
ACTCACTCTGGCAAGACTCCCTATGAATTCCACGAATGGCCTATGGGCTGCAAACAGAGCTCAGACCTTC
CCAGATATCAGAAAGTCTCCTCAGGAGACAAACCCTACAAATGTAAAGAATGTGGCAAGGGCTTCAGGCG
CAGCTCTTCCCTTCACAACCATCATCGAGTCCACACAGGGGAGATGCCCTACAAATGCGATGAATGTGGG
AAAGGGTTTGGATTTAGGTCACTTCTTTGTATTCATCAGGGAGTACACACAGGGAAAAAGCCCTATAAAT
GTGAAGAGTGTGGGAAGGGCTTTGATCAGAGCTCCAACCTTCTTGTCCATCAGAGAGTCCACACTGGAGA
GAAGCCCTACAAATGCAGTGAGTGTGGCAAGTGCTTTAGTTCAAGCTCCGTTCTTCAAGTCCACTGGAGG
TTTCACACAGGGGAGAAACCATATAGGTGTGGTGAGTGTGGAAAGGGCTTCAGCCAATGTACACACCTTC
ACATTCACCAGAGAGTCCACACAGGGGAGAAACCATACAAATGCAATGTGTGTGGAAAGGATTTTGCGTA
TAGCTCTGTTCTTCACACTCATCAGAGAGTTCACACTGGAGAAAAACCATATAAATGTGAAGTGTGTGGA
AAGTGCTTCAGTTACAGTTCATATTTTCACTTACATCAAAGAGATCACATCAGAGAGAAACCATATAAAT
GTGATGAGTGTGGTAAAGGCTTCAGCCGGAATTCAGATCTTAATGTTCACCTCAGAGTCCACACAGGAGA
GAGGCCCTATAAGTGTAAGGCATGTGGTAAGGGCTTCAGTCGTAATTCATACCTCCTTGCCCATCAGAGA
GTGCATATAGATGAGACACAGTACACACACTGTGAGCGTGGAAAGGACCTTCTGACTCATCAAAGACTAC
ATGAGCAGAGAGAAACATTATAA

Translation (590 aa):
MIKFQERVTFKDVAVVFTKEELALLDKAQINLYQDVMLENFRNLMLVRDGIKNNILNLQAKGLSYLSQEV
LHCWQIWKQRIRDLTVSQDYIVNLQEECSPHLEDVSLSEEWAGISLQISENENYVVNAIIKNQDITAWQS
LTQVLTPESWRKANIMTEPQNSQGRYKGIYMEEKLYRRAQHDDSLSWTSCDHHESQECKGEDPGRHPSCG
KNLGMKSTVEKRNAAHVLPQPFPCNNCGVAFADDTDPHVHHSTHLGEKSYKCDQYGKNFSQSQDLIVHCK
THSGKTPYEFHEWPMGCKQSSDLPRYQKVSSGDKPYKCKECGKGFRRSSSLHNHHRVHTGEMPYKCDECG
KGFGFRSLLCIHQGVHTGKKPYKCEECGKGFDQSSNLLVHQRVHTGEKPYKCSECGKCFSSSSVLQVHWR
FHTGEKPYRCGECGKGFSQCTHLHIHQRVHTGEKPYKCNVCGKDFAYSSVLHTHQRVHTGEKPYKCEVCG
KCFSYSSYFHLHQRDHIREKPYKCDECGKGFSRNSDLNVHLRVHTGERPYKCKACGKGFSRNSYLLAHQR
VHIDETQYTHCERGKDLLTHQRLHEQRETL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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