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Report for CCDS54502.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54502.1 Public Homo sapiens 22 ZDHHC8 24 110 108 CCDS HistoryNCBI Gene:29801Re-query CCDS DB by CCDS ID:54502.1Re-query CCDS DB by GeneID:29801See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54502.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405930.3 ENSP00000384716.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405930.3Link to Ensembl Protein Viewer:ENSP00000384716.3Re-query CCDS DB by Nucleotide ID:ENST00000405930Re-query CCDS DB by Protein ID:ENSP00000384716
Original member Current member NCBI NM_001185024.2 NP_001171953.1 Accepted alive Link to Nucleotide Sequence:NM_001185024.2Link to Protein Sequence:NP_001171953.1Re-query CCDS DB by Nucleotide ID:NM_001185024Re-query CCDS DB by Protein ID:NP_001171953Link to BLAST:NP_001171953.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171953.1 778 Q9ULC8-3 778 100% 0 0

Chromosomal Locations for CCDS 54502.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 20131948 20132051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20139194 20139315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20139478 20139635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20139720 20139892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20140115 20140217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20140617 20140708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20140871 20141012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20141217 20141337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20141421 20141530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20142756 20143756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 20147021 20147231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2337 nt):
ATGCCCCGCAGCCCCGGGACGCGCCTCAAACCCGCCAAGTACATCCCGGTGGCCACGGCCGCCGCGCTGC
TGGTCGGCTCCAGCACCCTCTTCTTCGTGTTCACGTGCCCGTGGTTGACACGAGCTGTGTCCCCAGCTGT
TCCCGTCTACAATGGCATCATCTTCCTCTTTGTCCTGGCCAACTTCAGCATGGCCACTTTCATGGACCCT
GGTGTTTTCCCCCGAGCGGATGAGGATGAGGACAAGGAGGACGACTTCCGGGCTCCGCTGTACAAGAACG
TGGATGTGCGAGGTATCCAGGTCCGCATGAAGTGGTGTGCCACGTGCCACTTCTACCGCCCGCCGCGCTG
CTCCCACTGCAGCGTCTGTGACAACTGTGTAGAGGACTTTGACCACCACTGCCCCTGGGTCAACAACTGC
ATCGGGCGTCGAAACTATCGCTACTTCTTCCTGTTCCTGCTGTCACTCAGTGCACACATGGTGGGCGTCG
TGGCCTTCGGCCTGGTCTACGTGCTGAACCACGCTGAGGGGCTGGGAGCCGCGCACACCACCATCACCAT
GGCTGTCATGTGTGTGGCCGGCCTCTTCTTCATCCCTGTCATTGGCCTCACTGGCTTCCATGTGGTGCTG
GTCACTCGGGGGCGCACCACCAACGAGCAGGTGACTGGGAAGTTCCGCGGGGGTGTGAACCCTTTCACCC
GAGGCTGCTGTGGGAATGTGGAGCACGTGCTGTGTAGCCCCCTGGCGCCCCGGTACGTGGTGGAGCCACC
CCGGCTGCCGCTCGCGGTGAGTTTGAAGCCGCCTTTCCTTAGGCCTGAACTCCTGGACCGAGCTGCACCG
CTCAAGGTCAAGCTTAGTGACAACGGGCTGAAGGCTGGCCTGGGCCGTAGCAAGTCCAAGGGCAGCCTGG
ACCGGCTGGATGAGAAGCCACTGGACTTGGGGCCACCACTGCCCCCCAAGATAGAGGCTGGCACGTTCAG
CAGTGACCTGCAGACCCCGCGCCCAGGCAGTGCTGAGAGTGCCCTGTCGGTGCAGAGGACCAGCCCCCCG
ACACCTGCCATGTACAAGTTTAGGCCGGCTTTCCCCACGGGTCCCAAGGTGCCCTTCTGTGGACCAGGCG
AGCAGGTTCCAGGCCCTGATTCCCTGACCCTGGGGGACGACAGCATCCGTAGCCTGGACTTTGTGTCCGA
GCCGAGCCTGGACCTCCCTGACTATGGGCCAGGGGGCCTGCATGCAGCCTACCCGCCATCCCCACCGCTC
AGCGCCTCTGATGCCTTCTCGGGCGCTTTGCGCTCCCTGAGCCTCAAGGCCTCGAGCCGGCGGGGCGGGG
ATCATGTGGCCCTGCAGCCCCTGCGCTCTGAGGGGGGGCCCCCCACGCCCCACCGTAGCATTTTTGCCCC
CCATGCACTGCCCAACCGCAACGGCAGCCTGTCCTATGACAGCCTGCTCAATCCTGGCTCGCCTGGTGGC
CACGCCTGCCCTGCCCACCCAGCAGTTGGCGTGGCCGGATACCACTCACCCTACCTGCATCCTGGGGCAA
CGGGCGACCCGCCACGGCCCCTACCCCGCAGCTTCAGCCCCGTGCTGGGCCCCCGCCCCCGGGAGCCCTC
GCCTGTGCGCTACGACAACCTGTCCAGGACCATCATGGCATCCATCCAGGAGCGCAAGGACAGGGAGGAG
CGTGAGCGCCTGCTGCGCTCCCAGGCCGACTCACTCTTCGGCGACTCAGGCGTCTATGACGCTCCCAGCT
CCTACAGCCTGCAGCAGGCCAGTGTGCTGTCCGAGGGCCCCCGAGGTCCCGCGCTGCGCTATGGCTCCAG
AGACGACCTTGTGGCTGGGCCCGGCTTCGGTGGCGCCCGCAACCCTGCCCTGCAGACGTCACTGTCCTCG
CTGTCCAGCTCCGTGAGCCGTGCACCGCGGACGTCGTCCTCCTCCCTGCAGGCTGATCAGGCCAGCAGCA
ACGCCCCGGGGCCCCGGCCCAGCAGTGGCTCACACAGGTCACCTGCACGCCAGGGCCTGCCCTCCCCGCC
CGGCACTCCCCACTCACCATCCTACGCGGGCCCCAAAGCTGTCGCCTTCATCCACACGGACCTCCCAGAG
CCACCGCCCTCGCTGACCGTGCAGAGGGGGCGGATTGGCACCTGCACCCGTGGATGGGGGCGGCGTGGCC
AGCCTTGGGTGCCTCCTGGGCTGCACCTGTGCCACCTTGGCCGCCCGGAGGACCGCCCACCACTGCGGGC
CCCCTGGAGCCAGGCCGCCGGGGCACCCCCACGCGGGGCCATGTGCCGCCTGCACTTGGCTGCCTCCAGT
CTTTTCCCCAGCCTCTCGGGGCCCTAG

Translation (778 aa):
MPRSPGTRLKPAKYIPVATAAALLVGSSTLFFVFTCPWLTRAVSPAVPVYNGIIFLFVLANFSMATFMDP
GVFPRADEDEDKEDDFRAPLYKNVDVRGIQVRMKWCATCHFYRPPRCSHCSVCDNCVEDFDHHCPWVNNC
IGRRNYRYFFLFLLSLSAHMVGVVAFGLVYVLNHAEGLGAAHTTITMAVMCVAGLFFIPVIGLTGFHVVL
VTRGRTTNEQVTGKFRGGVNPFTRGCCGNVEHVLCSPLAPRYVVEPPRLPLAVSLKPPFLRPELLDRAAP
LKVKLSDNGLKAGLGRSKSKGSLDRLDEKPLDLGPPLPPKIEAGTFSSDLQTPRPGSAESALSVQRTSPP
TPAMYKFRPAFPTGPKVPFCGPGEQVPGPDSLTLGDDSIRSLDFVSEPSLDLPDYGPGGLHAAYPPSPPL
SASDAFSGALRSLSLKASSRRGGDHVALQPLRSEGGPPTPHRSIFAPHALPNRNGSLSYDSLLNPGSPGG
HACPAHPAVGVAGYHSPYLHPGATGDPPRPLPRSFSPVLGPRPREPSPVRYDNLSRTIMASIQERKDREE
RERLLRSQADSLFGDSGVYDAPSSYSLQQASVLSEGPRGPALRYGSRDDLVAGPGFGGARNPALQTSLSS
LSSSVSRAPRTSSSSLQADQASSNAPGPRPSSGSHRSPARQGLPSPPGTPHSPSYAGPKAVAFIHTDLPE
PPPSLTVQRGRIGTCTRGWGRRGQPWVPPGLHLCHLGRPEDRPPLRAPWSQAAGAPPRGAMCRLHLAASS
LFPSLSGP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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