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Report for CCDS93468.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93468.1 Public Homo sapiens 4 ADD1 24 110 108 CCDS HistoryNCBI Gene:118Re-query CCDS DB by CCDS ID:93468.1Re-query CCDS DB by GeneID:118See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93468.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000651918.1 ENSP00000498269.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000651918.1Link to Ensembl Protein Viewer:ENSP00000498269.1Re-query CCDS DB by Nucleotide ID:ENST00000651918Re-query CCDS DB by Protein ID:ENSP00000498269
Original member Current member NCBI NM_001354757.2 NP_001341686.1 Accepted alive Link to Nucleotide Sequence:NM_001354757.2Link to Protein Sequence:NP_001341686.1Re-query CCDS DB by Nucleotide ID:NM_001354757Re-query CCDS DB by Protein ID:NP_001341686Link to BLAST:NP_001341686.1
Original member Current member NCBI NM_001354758.2 NP_001341687.1 Accepted alive Link to Nucleotide Sequence:NM_001354758.2Link to Protein Sequence:NP_001341687.1Re-query CCDS DB by Nucleotide ID:NM_001354758Re-query CCDS DB by Protein ID:NP_001341687Link to BLAST:NP_001341687.1
Original member Current member NCBI NM_014190.4 NP_054909.2 Accepted alive Link to Nucleotide Sequence:NM_014190.4Link to Protein Sequence:NP_054909.2Re-query CCDS DB by Nucleotide ID:NM_014190Re-query CCDS DB by Protein ID:NP_054909Link to BLAST:NP_054909.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001341686.1 631 P35611-2 631 100% 0 0
NP_001341687.1 631 P35611-2 631 100% 0 0
NP_054909.2 631 P35611-2 631 100% 0 0

Chromosomal Locations for CCDS 93468.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 2875916 2876110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2881898 2882060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2884515 2884666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2894013 2894093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2894582 2894731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2898184 2898327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2898433 2898531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2899259 2899435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2904764 2905015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2907743 2907844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2908515 2908604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2914884 2915040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2926014 2926112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2926642 2926675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 2928171 2928171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1896 nt):
ATGAATGGTGATTCTCGTGCTGCGGTGGTGACCTCACCACCCCCGACCACAGCCCCTCACAAGGAGAGGT
AC
TTCGACCGAGTAGATGAGAACAACCCAGAGTACTTGAGGGAGAGGAACATGGCACCAGACCTTCGCCA
G
GACTTCAACATGATGGAGCAAAAGAAGAGGGTGTCCATGATTCTGCAAAGCCCTGCTTTCTGTGAAGAA
TTG
GAATCAATGATACAGGAGCAATTTAAGAAGGGGAAGAACCCCACAGGCCTATTGGCATTACAGCAGA
TT
GCAGATTTTATGACCACGAATGTACCAAATGTCTACCCAGCAGCTCCGCAAGGAGGGATGGCTGCCTT
A
AACATGAGTCTTGGTATGGTGACTCCTGTGAACGATCTTAGAGGATCTGATTCTATTGCGTATGACAAA
GGA
GAGAAGTTATTACGGTGTAAATTGGCAGCGTTTTATAGACTAGCAGATCTCTTTGGGTGGTCTCAGC
TT
ATCTACAATCATATCACAACCAGAGTGAACTCCGAGCAGGAACACTTCCTCATTGTCCCTTTTGGGCT
T
CTTTACAGTGAAGTGACTGCATCCAGTTTGGTTAAGATCAATCTACAAGGAGATATAGTAGATCGTGGA
AGC
ACTAATCTGGGAGTGAATCAGGCCGGCTTCACCTTACACTCTGCAATTTATGCTGCACGCCCGGACG
TG
AAGTGCGTCGTGCACATTCACACCCCAGCAGGGGCTGCGGTCTCTGCAATGAAATGTGGCCTCTTGCC
A
ATCTCCCCGGAGGCGCTTTCCCTTGGAGAAGTGGCTTATCATGACTACCATGGCATTCTGGTTGATGAA
GAG
GAAAAAGTTTTGATTCAGAAAAATCTGGGGCCTAAAAGCAAGGTTCTTATTCTCCGGAACCATGGGC
TC
GTGTCAGTTGGAGAGAGCGTTGAGGAGGCCTTCTATTACATCCATAACCTTGTGGTTGCCTGTGAGAT
C
CAGGTTCGAACTCTGGCCAGTGCAGGAGGACCAGACAACTTAGTCCTGCTGAATCCTGAGAAGTACAAA
GCC
AAGTCCCGTTCCCCAGGGTCTCCGGTAGGGGAAGGCACTGGATCGCCTCCCAAGTGGCAGATTGGTG
AG
CAGGAATTTGAAGCCCTCATGCGGATGCTCGATAATCTGGGCTACAGAACTGGCTACCCTTATCGATA
C
CCTGCTCTGAGAGAGAAGTCTAAAAAATACAGCGATGTGGAGGTTCCTGCTAGTGTCACAGGTTACTCC
TTT
GCTAGTGACGGTGATTCGGGCACTTGCTCCCCACTCAGACACAGTTTTCAGAAGCAGCAGCGGGAGA
AG
ACAAGATGGCTGAACTCTGGCCGGGGCGACGAAGCTTCCGAGGAAGGGCAGAATGGAAGCAGTCCCAA
G
TCGAAGACTAAGTGGACTAAAGAGGATGGACATAGAACTTCCACCTCTGCTGTCCCTAACCTGTTTGTT
CCA
TTGAACACTAACCCAAAAGAGGTCCAGGAGATGAGGAACAAGATCCGAGAGCAGAATTTACAGGACA
TT
AAGACGGCTGGCCCTCAGTCCCAGGTTTTGTGTGGTGTAGTGATGGACAGGAGCCTCGTCCAGGGAGA
G
CTGGTGACGGCCTCCAAGGCCATCATTGAAAAGGAGTACCAGCCCCACGTCATTGTGAGCACCACGGGC
CCC
AACCCCTTCACCACACTCACAGACCGTGAGCTGGAGGAGTACCGCAGGGAGGTGGAGAGGAAGCAGA
AG
GGCTCTGAAGAGAATCTGGACGAGGCTAGAGAACAGAAAGAAAAGAGTCCTCCAGACCAGCCTGCGGT
C
CCCCACCCGCCTCCCAGCACTCCCATCAAGCTGGAGGAAGGAGACGGATGCGCTAGAGAGTACCTGTTA
CCC
TAA


Translation (631 aa):
MNGDSRAAVVTSPPPTTAPHKERYFDRVDENNPEYLRERNMAPDLRQDFNMMEQKKRVSMILQSPAFCEE
L
ESMIQEQFKKGKNPTGLLALQQIADFMTTNVPNVYPAAPQGGMAALNM
SLGMVTPVNDLRGSDSIAYDK
G
EKLLRCKLAAFYRLADLFGWSQLIYNHIT
TRVNSEQEHFLIVPFGLLYSEVTASSLVKINLQGDIVDRG
S
TNLGVNQAGFTLHSAIYAARPDVKCVVHIHTPAGAA
VSAMKCGLLPISPEALSLGEVAYHDYHGILVDE
E
EKVLIQKNLGPKSK
VLILRNHGLVSVGESVEEAFYYIHNLVVACEIQVRTLASAGGPDNLVLLNPEKYK
A
KSRSPGSPVGEGTGSPPKWQIGEQEFEALMRMLDNL
GYRTGYPYRYPALREKSKKYSDVEVPASVTGYS
F
ASDGDSGTCSPLRHSFQKQQREKTRWLNSGRGDEASEEGQNGSSPKSKTK
WTKEDGHRTSTSAVPNLFV
P
LNTNPKEVQEMRNK
IREQNLQDIKTAGPQSQVLCGVVMDRSLVQGELVTASKAIIEKEYQPHVIVSTTG
P
NPFTTLTDRELEEYRREVERKQKGSE
ENLDEAREQKEKSPPDQPAVPHPPPSTPIKLEEGDGCAREYLL
P




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser