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Report for CCDS76563.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76563.1 Public Homo sapiens 12 ZNF385A 24 110 108 CCDS HistoryNCBI Gene:25946Re-query CCDS DB by CCDS ID:76563.1Re-query CCDS DB by GeneID:25946See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76563.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000551771.5 ENSP00000447162.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000551771.5Link to Ensembl Protein Viewer:ENSP00000447162.1Re-query CCDS DB by Nucleotide ID:ENST00000551771Re-query CCDS DB by Protein ID:ENSP00000447162
Original member Current member NCBI NM_001290001.2 NP_001276930.1 Accepted alive Link to Nucleotide Sequence:NM_001290001.2Link to Protein Sequence:NP_001276930.1Re-query CCDS DB by Nucleotide ID:NM_001290001Re-query CCDS DB by Protein ID:NP_001276930Link to BLAST:NP_001276930.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276930.1 285 Q96PM9-2 285 100% 0 0

Chromosomal Locations for CCDS 76563.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 54370256 54370486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54370626 54370721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54370927 54371096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54373973 54374135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54375844 54375954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54384428 54384514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (858 nt):
ATGCAGCCCCCACTGGACCTCAAGCAGATCCTGCCCTTCCCACTCGAGCCAGCCCCTACCCTTGGCCTCT
TCAGCAACTACAGCACCATGGACCCTGTGCAGAAGGCTGTGCTCTCCCACACTTTTGGGGGACCCTTGCT
CAAGACCAAGCGGCCCGTCATTTCCTGTAATATCTGTCAAATCCGCTTCAATTCTCAGAGCCAGGCTGAG
GCGCACTACAAAGGTAATCGCCACGCCCGACGAGTCAAAGGCATTGAGGCTGCCAAGACCAGAGGCAGGG
AGCCTGGCGTCCGAGAACCTGGAGACCCAGCTCCCCCAGGCAGCACCCCAACAAATGGGGATGGTGTAGC
ACCCCGTCCAGGTACTAAGCACAAGACAATTCTGGAGGCCCGAAGTGGGCTCGGGCCCATCAAAGCTTAC
CCTCGGCTGGGGCCTCCCACCCCGGGGGAACCAGAGGCTCCTGCCCAGGACCGAACTTTCCACTGTGAGA
TCTGCAATGTCAAGGTCAACTCGGAGGTCCAACTGAAACAGCACATCTCCAGCCGGCGGCACCGAGACGG
CGTGGCCGGGAAGCCCAACCCACTACTGAGCCGTCACAAGAAGTCTAGGGGCGCCGGGGAGCTGGCGGGC
ACGCTGACTTTCTCCAAGGAGCTGCCCAAGTCCCTGGCGGGCGGCCTGCTCCCCAGCCCCCTGGCGGTGG
CTGCAGTGATGGCAGCGGCAGCAGGCTCGCCGCTGTCCCTGCGCCCGGCTCCAGCCGCACCTCTTCTCCA
GGGACCGCCGATCACTCACCCTCTGCTTCACCCGGCCCCCGGACCCATCCGAACTGCGCACGGACCCATC
CTCTTCTCCCCGTACTGA

Translation (285 aa):
MQPPLDLKQILPFPLEPAPTLGLFSNYSTMDPVQKAVLSHTFGGPLLKTKRPVISCNICQIRFNSQSQAE
AHYKGNRHARRVKGIEAAKTRGREPGVREPGDPAPPGSTPTNGDGVAPRPGTKHKTILEARSGLGPIKAY
PRLGPPTPGEPEAPAQDRTFHCEICNVKVNSEVQLKQHISSRRHRDGVAGKPNPLLSRHKKSRGAGELAG
TLTFSKELPKSLAGGLLPSPLAVAAVMAAAAGSPLSLRPAPAAPLLQGPPITHPLLHPAPGPIRTAHGPI
LFSPY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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