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Report for CCDS58586.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58586.1 Public Homo sapiens 17 PRR29 24 110 108 CCDS HistoryNCBI Gene:92340Re-query CCDS DB by CCDS ID:58586.1Re-query CCDS DB by GeneID:92340See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58586.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000579184.5 ENSP00000462097.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000579184.5Link to Ensembl Protein Viewer:ENSP00000462097.1Re-query CCDS DB by Nucleotide ID:ENST00000579184Re-query CCDS DB by Protein ID:ENSP00000462097
Original member Current member NCBI NM_001191030.2 NP_001177959.1 Accepted alive Link to Nucleotide Sequence:NM_001191030.2Link to Protein Sequence:NP_001177959.1Re-query CCDS DB by Nucleotide ID:NM_001191030Re-query CCDS DB by Protein ID:NP_001177959Link to BLAST:NP_001177959.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001177959.1 182 P0C7W0-4 182 100% 0 0

Chromosomal Locations for CCDS 58586.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 63998365 63998424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63998728 63998782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 63998968 63999074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64001084 64001310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64001467 64001537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 64001733 64001761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (549 nt):
ATGGCCTCTGGGGCGGGCGGAAGCTGGGGTCGCTCCCCACCGCAGAGCGCAGTCCCGACGCCCCTCTCGT
GGGCCGTCCCACCTGCGCCCCCGCAGCCAGGCCGCGTGAAGGAAGACCTGCTGGAACTGATGATGCTGCA
GAACGCGCAGATGCACCAGCTGCTGCTGAGTCGCCTGGTGGCTGGAGCGCTGCAGCCCCGGCCTGCCTCG
CCCTGCCCTCAGGTCTACCTGGAGGTTCCACAGGAAGAGCCTGAGGAGGAGGAGGAGGAGATGGACGTGC
GGGAGAAAGGGCCTTTGGTGTTTCACCACCACTACTTGCCCTATTTGATGCCCTCCCCGGGTGCCCTGCT
GCCCTGGCCAGCCCCCTTCTTCCCCACCCCTGCTTGTCAGCCCTACTTGCAGGACGTGCCCAGGATTCAG
CACTGTCCTGCCTCCAGGGAAAGGGAGGTGAGAGCTGTGCCCCCACCCCCACCCCCCAGTGCCACAGGGA
CTGTGGGTGCTGATGTACCCCCGGCTTCAGACTACTATGATGCCGAGAGCCTCCTATGA

Translation (182 aa):
MASGAGGSWGRSPPQSAVPTPLSWAVPPAPPQPGRVKEDLLELMMLQNAQMHQLLLSRLVAGALQPRPAS
PCPQVYLEVPQEEPEEEEEEMDVREKGPLVFHHHYLPYLMPSPGALLPWPAPFFPTPACQPYLQDVPRIQ
HCPASREREVRAVPPPPPPSATGTVGADVPPASDYYDAESLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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