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Report for CCDS53606.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53606.1 Public Homo sapiens 11 KCNJ11 24 110 108 CCDS HistoryNCBI Gene:3767Re-query CCDS DB by CCDS ID:53606.1Re-query CCDS DB by GeneID:3767See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53606.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000528731.1 ENSP00000434755.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000528731.1Link to Ensembl Protein Viewer:ENSP00000434755.1Re-query CCDS DB by Nucleotide ID:ENST00000528731Re-query CCDS DB by Protein ID:ENSP00000434755
Original member Current member EBI ENST00000682764.1 ENSP00000506780.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682764.1Link to Ensembl Protein Viewer:ENSP00000506780.1Re-query CCDS DB by Nucleotide ID:ENST00000682764Re-query CCDS DB by Protein ID:ENSP00000506780
Original member Current member EBI ENST00000682350.1 ENSP00000508090.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000682350.1Link to Ensembl Protein Viewer:ENSP00000508090.1Re-query CCDS DB by Nucleotide ID:ENST00000682350Re-query CCDS DB by Protein ID:ENSP00000508090
Original member Current member NCBI NM_001166290.2 NP_001159762.1 Accepted alive Link to Nucleotide Sequence:NM_001166290.2Link to Protein Sequence:NP_001159762.1Re-query CCDS DB by Nucleotide ID:NM_001166290Re-query CCDS DB by Protein ID:NP_001159762Link to BLAST:NP_001159762.1
Original member Current member NCBI NM_001377296.1 NP_001364225.1 Accepted alive Link to Nucleotide Sequence:NM_001377296.1Link to Protein Sequence:NP_001364225.1Re-query CCDS DB by Nucleotide ID:NM_001377296Re-query CCDS DB by Protein ID:NP_001364225Link to BLAST:NP_001364225.1
Original member Current member NCBI NM_001377297.1 NP_001364226.1 Accepted alive Link to Nucleotide Sequence:NM_001377297.1Link to Protein Sequence:NP_001364226.1Re-query CCDS DB by Nucleotide ID:NM_001377297Re-query CCDS DB by Protein ID:NP_001364226Link to BLAST:NP_001364226.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001159762.1 303 Q14654-2 303 100% 0 0
NP_001364225.1 303 Q14654-2 303 100% 0 0
NP_001364226.1 303 Q14654-2 303 100% 0 0

Chromosomal Locations for CCDS 53606.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 17386919 17387830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGCCTGGTGGCTCATCGCCTTCGCCCACGGTGACCTGGCCCCCAGCGAGGGCACTGCTGAGCCCTGTG
TCACCAGCATCCACTCCTTCTCGTCTGCCTTCCTTTTCTCCATTGAGGTCCAAGTGACTATTGGCTTTGG
GGGGCGCATGGTGACTGAGGAGTGCCCACTGGCCATCCTGATCCTCATCGTGCAGAACATCGTGGGGCTC
ATGATCAACGCCATCATGCTTGGCTGCATCTTCATGAAGACTGCCCAAGCCCACCGCAGGGCTGAGACCC
TCATCTTCAGCAAGCATGCGGTGATCGCCCTGCGCCACGGCCGCCTCTGCTTCATGCTACGTGTGGGTGA
CCTCCGCAAGAGCATGATCATCAGCGCCACCATCCACATGCAGGTGGTACGCAAGACCACCAGCCCCGAG
GGCGAGGTGGTGCCCCTCCACCAGGTGGACATCCCCATGGAGAACGGCGTGGGTGGCAACAGCATCTTCC
TGGTGGCCCCGCTGATCATCTACCATGTCATTGATGCCAACAGCCCACTCTACGACCTGGCACCCAGCGA
CCTGCACCACCACCAGGACCTCGAGATCATCGTCATCCTGGAAGGCGTGGTGGAAACCACGGGCATCACC
ACCCAGGCCCGCACCTCCTACCTGGCCGATGAGATCCTGTGGGGCCAGCGCTTTGTGCCCATTGTAGCTG
AGGAGGACGGACGTTACTCTGTGGACTACTCCAAGTTTGGCAACACCGTCAAAGTGCCCACACCACTCTG
CACGGCCCGCCAGCTTGATGAGGACCACAGCCTACTGGAAGCTCTGACCCTCGCCTCAGCCCGCGGGCCC
CTGCGCAAGCGCAGCGTGCCCATGGCCAAGGCCAAGCCCAAGTTCAGCATCTCTCCAGATTCCCTGTCCT
GA

Translation (303 aa):
MAWWLIAFAHGDLAPSEGTAEPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTEECPLAILILIVQNIVGL
MINAIMLGCIFMKTAQAHRRAETLIFSKHAVIALRHGRLCFMLRVGDLRKSMIISATIHMQVVRKTTSPE
GEVVPLHQVDIPMENGVGGNSIFLVAPLIIYHVIDANSPLYDLAPSDLHHHQDLEIIVILEGVVETTGIT
TQARTSYLADEILWGQRFVPIVAEEDGRYSVDYSKFGNTVKVPTPLCTARQLDEDHSLLEALTLASARGP
LRKRSVPMAKAKPKFSISPDSLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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