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Report for CCDS83210.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
83210.1 Public Homo sapiens 7 LAMTOR4 24 110 108 CCDS HistoryNCBI Gene:389541Re-query CCDS DB by CCDS ID:83210.1Re-query CCDS DB by GeneID:389541See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 83210.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000460732.5 ENSP00000479176.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000460732.5Link to Ensembl Protein Viewer:ENSP00000479176.1Re-query CCDS DB by Nucleotide ID:ENST00000460732Re-query CCDS DB by Protein ID:ENSP00000479176
Original member Current member NCBI NM_001318236.2 NP_001305165.1 Accepted alive Link to Nucleotide Sequence:NM_001318236.2Link to Protein Sequence:NP_001305165.1Re-query CCDS DB by Nucleotide ID:NM_001318236Re-query CCDS DB by Protein ID:NP_001305165Link to BLAST:NP_001305165.1

Chromosomal Locations for CCDS 83210.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100148973 100148975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100149499 100149579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100153400 100153517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100153850 100153896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (249 nt):
ATGACTTCTGCGCTGACCCAGGGGCTGGAGCGAATCCCAGACCAGCTCGGCTACCTGGTACTGAGTGAAG
GTGCAGTGCTGGCGTCATCTGGGGACCTGGAGAATGATGAGCAGGCAGCCAGTGCCATCTCTGAGCTGGT
CAGCACAGCCTGCGGTTTCCGGCTGCACCGCGGCATGAATGTGCCCTTCAAGCGCCTGTCTGGTGTGTCT
CTCCTCCAGTGGTCTTTGGAGAACACACACTGCTGGTGA

Translation (82 aa):
MTSALTQGLERIPDQLGYLVLSEGAVLASSGDLENDEQAASAISELVSTACGFRLHRGMNVPFKRLSGVS
LLQWSLENTHCW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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