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Report for CCDS58517.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58517.1 Public Homo sapiens 17 DHRS7C 24 110 108 CCDS HistoryNCBI Gene:201140Re-query CCDS DB by CCDS ID:58517.1Re-query CCDS DB by GeneID:201140See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58517.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000571134.2 ENSP00000459579.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000571134.2Link to Ensembl Protein Viewer:ENSP00000459579.1Re-query CCDS DB by Nucleotide ID:ENST00000571134Re-query CCDS DB by Protein ID:ENSP00000459579
Original member Current member NCBI NM_001105571.3 NP_001099041.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001105571.3Link to Protein Sequence:NP_001099041.1Re-query CCDS DB by Nucleotide ID:NM_001105571Re-query CCDS DB by Protein ID:NP_001099041Link to BLAST:NP_001099041.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099041.1 311 A6NNS2-2 311 100% 0 0

Chromosomal Locations for CCDS 58517.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 9771488 9771696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9772767 9772922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9777193 9777285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9779825 9780035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9781482 9781594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 9791131 9791284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (936 nt):
ATGGGAGTCATGGCCATGCTGATGCTCCCCCTGCTGCTGCTGGGAATCAGCGGCCTCCTCTTCATTTACC
AA
GAGGTGTCCAGGCTGTGGTCAAAGTCAGCTGTGCAGAACAAAGTGGTGGTGATCACCGATGCCATCTC
A
GGACTGGGCAAGGAGTGTGCTCGGGTGTTCCACACAGGTGGGGCAAGGCTGGTGCTGTGTGGAAAGAAC
TGG
GAGAGGCTAGAGAACCTATATGATGCCTTGATCAGCGTGGCTGACCCCAGCAAGACATTCACCCCAA
AG
CTGGTCCTGTTGGACCTCTCAGACATCAGCTGTGTCCCAGATGTGGCAAAAGAAGTCCTGGATTGCTA
T
GGCTGTGTGGACATCCTCATCAACAATGCCAGTGTGAAGGTGAAGGGGCCTGCCCATAAGATTTCTCTG
GAG
CTCGACAAAAAGATCATGGATGCCAATTACTTTGGCCCCATCACATTGACGAAAGCCCTGCTTCCCA
AC
ATGATCTCCCGGAGAACAGGCCAAATCGTGTTAGTGAATAATATCCAAGGGAAGTTTGGAATCCCGTT
C
CGTACGACTTACGCTGCCTCCAAGCACGCAGCCCTGGGCTTCTTTGACTGCCTCCGAGCCGAAGTGGAG
GAA
TACGATGTTGTCATCAGCACCGTGAGCCCGACTTTCATCCGGTCGTACCACGTGTATCCAGAGCAAG
GA
AACTGGGAAGCTTCCATTTGGAAATTCTTTTTCAGGAAGCTGACCTACGGCGTGCACCCAGTAGAGGT
G
GCGGAGGAGGTGATGCGCACCGTGCGGAGGAAGAAGCAAGAGGTGTTTATGGCCAACCCCATCCCCAAG
GCC
GCCGTGTACGTCCGCACCTTCTTCCCGGAGTTCTTTTTCGCCGTGGTGGCCTGTGGGGTGAAGGAGA
AG
CTCAATGTCCCGGAGGAGGGGTAA


Translation (311 aa):
MGVMAMLMLPLLLLGISGLLFIYQEVSRLWSKSAVQNKVVVITDAISGLGKECARVFHTGGARLVLCGKN
W
ERLENLYDALISVADPSK
TFTPKLVLLDLSDISCVPDVAKEVLDCYGCVDILINNASVKVKGPAHKISL
E
LDKKIMDANYFGPITLTK
ALLPNMISRRTGQIVLVNNIQGKFGIPFRTTYAASKHAALGFFDCLRAEVE
E
YDVVISTVSPTFIRSYHVYPEQGNWEASIWK
FFFRKLTYGVHPVEVAEEVMRTVRRKKQEVFMANPIPK
A
AVYVRTFFPEFFFAVVACGVKEKLNVPEEG




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser