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Report for CCDS17444.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17444.1 Public Mus musculus 3 Prss48 23 108 98 CCDS HistoryNCBI Gene:368202Re-query CCDS DB by CCDS ID:17444.1Re-query CCDS DB by GeneID:368202See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17444.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061343.3 ENSMUSP00000051199.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061343.3Link to Ensembl Protein Viewer:ENSMUSP00000051199.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000061343Re-query CCDS DB by Protein ID:ENSMUSP00000051199
Original member Current member NCBI NM_001001650.2 NP_001001650.1 Accepted alive Link to Nucleotide Sequence:NM_001001650.2Link to Protein Sequence:NP_001001650.1Re-query CCDS DB by Nucleotide ID:NM_001001650Re-query CCDS DB by Protein ID:NP_001001650Link to BLAST:NP_001001650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001650.1 312 Q14B25 312 100% 0 0

Chromosomal Locations for CCDS 17444.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 85993820 85994080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 85997212 85997378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 85998054 85998313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 86000382 86000544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 86000886 86000930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 86002449 86002491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGGCCCTGCTGGCCTTAAGGTTCTGCTGCTGCTTTTTCTGGGAGCTTTCCAGGGCTCTTTTACCAAAA
AGAAAAACTTGCAATCAGTATGTGGACGACCTGTACACACTGGACGCATTGTGGGTGGCCAAGATGCTGC
TTTGGGGCGCTGGCCCTGGCAGGTGAGCCTGCGTTTTGACTACACCCATTCTTGTGGAGGTTCTCTCATC
AGTGACCACTGGGTGCTGACGGCAGCACACTGCATAAAAAAGACCTGGTACAGTTTTCTATACAGTGTGT
GGCTTGGATCCATCGATAGAGAGTACTCAAGCACAGGCAAAGAATACTATGTGTCCAGAATCGCCATCCC
CGACAAACACCGCCACACAGAAGCAGACATCGCCCTGCTGAAGCTGTCTTCCCGGGTCACCTTCTCATCG
GTCATTCTGCCCATCTGCTTGCCCAATATCTCAAAGCAGCTGACAGTTCCAGCTTCTTGCTGGGTGACTG
GATGGGGACAAAATCAGGAAGGTCACTACCCCTCTACCCTCCAAGAACTTGAAGTGCCTGTCATTTCCAG
TGAGGCGTGTGAACAACTCTACAACCCAATTGGTGTCTTCCTCCCGGATCTGGAGCGGGTCATCAAGGAA
GACATGTTCTGTGCTGGTGAGAGGCAGTCGAGGAAGGATAGCTGCAAGGGCGATTCTGGAGGGCCTCTGT
CCTGTCACATTGATGGTGTCTGGAGGCTGATGGGTGTGGTAAGCTGGGGTTTGGAATGCGGTAAGGATCT
TCCGGGAGTCTACACCAACGTGACCTACTACCAAAAGTGGATCAGTGCTATTATCTCGAGAGCTCCTCCG
GGCTGGGGTGGTGACAGCACCCACATGACTTCCTGTTCCCTACTATGTTACTTTCTCTGGCTCTCCTGGG
ATCCTCCCGAGCCTTTGGCCCTAGCGTAA

Translation (312 aa):
MGPAGLKVLLLLFLGAFQGSFTKKKNLQSVCGRPVHTGRIVGGQDAALGRWPWQVSLRFDYTHSCGGSLI
SDHWVLTAAHCIKKTWYSFLYSVWLGSIDREYSSTGKEYYVSRIAIPDKHRHTEADIALLKLSSRVTFSS
VILPICLPNISKQLTVPASCWVTGWGQNQEGHYPSTLQELEVPVISSEACEQLYNPIGVFLPDLERVIKE
DMFCAGERQSRKDSCKGDSGGPLSCHIDGVWRLMGVVSWGLECGKDLPGVYTNVTYYQKWISAIISRAPP
GWGGDSTHMTSCSLLCYFLWLSWDPPEPLALA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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