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Report for CCDS38026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38026.1 Public Mus musculus 19 Gucy2g 23 108 98 CCDS HistoryNCBI Gene:73707Re-query CCDS DB by CCDS ID:38026.1Re-query CCDS DB by GeneID:73707See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 38026.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000069183.7 ENSMUSP00000068253.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000069183.7Link to Ensembl Protein Viewer:ENSMUSP00000068253.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000069183Re-query CCDS DB by Protein ID:ENSMUSP00000068253
Original member Current member NCBI NM_001081076.3 NP_001074545.1 Accepted alive Link to Nucleotide Sequence:NM_001081076.3Link to Protein Sequence:NP_001074545.1Re-query CCDS DB by Nucleotide ID:NM_001081076Re-query CCDS DB by Protein ID:NP_001074545Link to BLAST:NP_001074545.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074545.1 1100 Q6TL19 1100 100% 0 0

Chromosomal Locations for CCDS 38026.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 19 (NC_000085.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 55198684 55198788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55199464 55199555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55202095 55202193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55203011 55203185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55206152 55206344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55207863 55208003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55210212 55210389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55215045 55215200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55217263 55217431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55222327 55222398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55222874 55222978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55223687 55223770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55225961 55226098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55227343 55227518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55228123 55228235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55229708 55229843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55231018 55231159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55233039 55233224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55235548 55235657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55237750 55238098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 55240853 55241236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3303 nt):
ATGGCTTCTAGGACACGCTCTGAGTCTCCACTAGAACCTAGGCTCTATGCTGGGGCAGGAAGCCGTGCAG
ATCATCCATCTCTGGTTTTGATGCTGTCTGTCGTTATGCTAGTGACTTGTCTCGAAGCTGCTAAGCTCAC
CGTGGGGTTCCATGCCCCCTGGAACATCTCTCATCCATTTAGTGTTCAAAGGTTGGGGGCAGGACTCCAG
ACTGTTGTGGACAAGCTCAACTCAGAGCCAGTGGGTCTTGGGAACGTGAGCTGGGAGTTCACTTACACCA
ATTCAACATGCAGTGCCAAGGAGTCCCTTGCGGTTTTCATCGACCAGGTCCAGAAAGAACACATTTCTGC
TCTGTTTGGACCAGCATGCCCAGAAGCAGCAGAGGTTATTGGTTTATTGGCCTCTGAGTGGAACATCCCT
TTGTTTGACTTCGTTGGACAAATGGCAGCCCTGAAAGACCACTTCTGGTGTGACACCTGCGTGACACTTG
TGCCACCCAAGCAGGAAATCAGTGCGGTGCTTCGGGAAAGCCTGCGGTACCTGGGCTGGGAACATATCGG
GGTGTTTGGAGGTTCCTCTGCAGATTCCTCCTGGGAACAAGTGGATGAGATGTGGGGGGCTGTTGAGGAT
GGACTCCAGTTCCATTTCAACATCACTGCCAGCATGAGGTACAACAGCAGCAGCTCAGACCTTCTGCAGG
AAGGCCTCAGGAACATGTCGTATGTCGCCAGGGTCATCATCCTAATCTGCAGCTCGGAGGATGCAAGGCG
CATTCTGCAGGCTGCAGTGGACCTGGGACTCGACACTGGAGAATTCGTTTTCATCCTCTTGCAGCAGCTG
GAGGACAGTTTTTGGAAGGAAGTACTGACAAAGGACAAGGTGATACGCTTTCCCAAAGTCTATGAGTCGG
TGTTTCTCATCGCACCCAGCGCCTATGGAGGAGGCATTGGAGATGACGGTTTCCGGAAGCAAGTCTCCCA
AGAACTGAGGAGGCCACCCTTTCAAAGCTCCATCACCTCAGAGGACCAGGTGAGCCCGTACTCTGCCTAC
CTGCACGATGCTCTCTTACTCTACGCTCAGACTGTGGAGGAAATGAGGAAGGCTGAGAAAGACTTCCGGG
ATGGGCGGCAGCTGATTAGCACCCTGAGAGCTGGTCAGGTCACACTGCAGGGAATCACCGGTCCTGTGCT
TTTGGACTCCCAGGGGAAAAGGCACGTGGATTACTCCGTCTATGCTCTGCAGGAATCTGGAAACAGGTCC
CTCTTCCTTCCCTTTCTTCATTATGACAGTTTTCAGAAAGTAATCAGACCCTGGAGGAATGACTCGAACA
CCTCATGGCCCCATGGCTCCCTTCCTGAGTATAAACCTGGCTGTGGATTTCATAACGACCTTTGCAAAAC
GAAGCCACCCACTGTAGCAGGTATGACAGTGACTGTGACTGCTGTGATCCCCACGGTGACGTTCCTGGTT
CTTGCCTCGGCAGCTGCCATCACAGGTCTGATGTTATGGAGGTTGAGAGGGAAAGTGCAGAGCCATCCTG
GAGACACCTGGTGGCAGATCCGTTATGACAGCATCACTCTTCTGCCTCAGCACAAACTGTCCCACCGAGG
CACACCTGTGTCAAGACGTAATGTTAGCGATACATCTACTGTGAAGGCTTCTGCAGATTGTGGCTCCTTG
GTCAAGAGGCACCAGGATGAAGAGCTGTTCTTTGCCCCCGTGGGGCTTTACCAGGGAAATCAGGTGGCCC
TCTGCTATATTGGTGACGAAGCAGAAGCTTGGGTTAAGAAGCCAACTGTGCGGCGGGAAGTCTGCCTGAT
GTGCGAACTAAAGCATGAAAACATCGTCCCCTTCTTTGGTGTTTGCACAGAGCCACCTAACATCTGCATC
GTTACACAGTACTGCAAAAAAGGAAGTCTCCAGGATGTTATGAGGAACTCCGATCATGAGATAGATTGGA
TATTCAAGCTCTCCTTTGCGTATGACATAGTCAATGGCTTGCTGTTCCTGCATGGGAGCCCACTGAGGTC
TCACGGCAACCTGAAACCTTCCAACTGCCTGGTAGATAGTCACATGCAGCTGAAGCTGTCAGGATTTGGG
TTGTGGGAGTTCAAGCACGGCAGCACATGGAGGAGCTACAACCAGGAGGCCACAGACCATTCAGAGCTCT
ACTGGACAGCCCCAGAGCTGCTGCGGCTTCGGGAGAGTCCCTGTTCTGGCACCCCTCAGGGAGACGTTTA
CAGCTTTGCCATTCTCCTGAGGGACTTGATCCACCAGCAGGCCCACGGGCCCTTTGAGGACCTCGAGGCA
GCTCCAGAGGAAATCATCAGCCGCATCAAAGACCCCCGGGCACCCGTTCCGCTTCGGCCGTCCCTGTTGG
AGGATAAAGGTGATGGAAGGATTGTGGCCCTAGTGAGGGAGTGCTGGGATGAATCTCCAGAGCTAAGGCC
CATCTTCCCTTCCATCAAGAAGACGTTACGAGAAGCCAGTCCCAGAGGCCACGTGAGCATCCTGGATAGC
ATGATGGGGAAGCTGGAAACGTACGCCAATCACCTGGAGGAAGTGGTAGAGGAGCGGACCCGCGAGTTGG
TGGCAGAGAAAAGAAAGGTGGAGAAACTCCTGTCTACCATGTTGCCAAGCTTCGTGGGAGAACAGCTAAT
AGCCGGAAAGTCTGTAGAACCGGAACACTTTGAGTCTGTCACCATCTTCTTCTCTGACATCGTGGGGTTC
ACAAAGCTGTGTTCCCTCAGCTCCCCCCTGCAAGTGGTGAAGCTCCTCAACGACCTGTACAGCTTGTTTG
ACCACACGATACAGAGCCATGATGTATACAAGGTTGAAACCATTGGAGATGCCTACATGGTGGCAAGTGG
GCTCCCCATCCGCAACGGAGCTCAGCATGCCGACGAGATTGCCACCATGGCCCTGCACTTACTCAGTGTC
ACCACCCACTTCCAGATCGGGCACATGCCTGAGGAGAGGCTCAAGCTCCGCATAGGCCTCCACACAGGTC
CTGTGGTGGCCGGTGTGGTGGGAATCACCATGCCCAGGTACTGTCTGTTTGGAGACACTGTGAACATGGC
ATCCAGGATGGAAAGCAGCAGCTTGCCTCTCCGGATTCACGTTTCCCAGAGCACCGCAGGAGCTCTTCTA
GCAGCAGGGGGGTACCATCTGCAAAAGAGAGGCACCATTTCAGTCAAGGGCAAGGGAGAACAGACGACCT
TCTGGCTGAAAGGCAAAGATGGCTTCCCTGTCCCACTCCCTGAGTTTACGGAGGAAGAAGCTAAAGTTTC
AGAAATATTGTGA

Translation (1100 aa):
MASRTRSESPLEPRLYAGAGSRADHPSLVLMLSVVMLVTCLEAAKLTVGFHAPWNISHPFSVQRLGAGLQ
TVVDKLNSEPVGLGNVSWEFTYTNSTCSAKESLAVFIDQVQKEHISALFGPACPEAAEVIGLLASEWNIP
LFDFVGQMAALKDHFWCDTCVTLVPPKQEISAVLRESLRYLGWEHIGVFGGSSADSSWEQVDEMWGAVED
GLQFHFNITASMRYNSSSSDLLQEGLRNMSYVARVIILICSSEDARRILQAAVDLGLDTGEFVFILLQQL
EDSFWKEVLTKDKVIRFPKVYESVFLIAPSAYGGGIGDDGFRKQVSQELRRPPFQSSITSEDQVSPYSAY
LHDALLLYAQTVEEMRKAEKDFRDGRQLISTLRAGQVTLQGITGPVLLDSQGKRHVDYSVYALQESGNRS
LFLPFLHYDSFQKVIRPWRNDSNTSWPHGSLPEYKPGCGFHNDLCKTKPPTVAGMTVTVTAVIPTVTFLV
LASAAAITGLMLWRLRGKVQSHPGDTWWQIRYDSITLLPQHKLSHRGTPVSRRNVSDTSTVKASADCGSL
VKRHQDEELFFAPVGLYQGNQVALCYIGDEAEAWVKKPTVRREVCLMCELKHENIVPFFGVCTEPPNICI
VTQYCKKGSLQDVMRNSDHEIDWIFKLSFAYDIVNGLLFLHGSPLRSHGNLKPSNCLVDSHMQLKLSGFG
LWEFKHGSTWRSYNQEATDHSELYWTAPELLRLRESPCSGTPQGDVYSFAILLRDLIHQQAHGPFEDLEA
APEEIISRIKDPRAPVPLRPSLLEDKGDGRIVALVRECWDESPELRPIFPSIKKTLREASPRGHVSILDS
MMGKLETYANHLEEVVEERTRELVAEKRKVEKLLSTMLPSFVGEQLIAGKSVEPEHFESVTIFFSDIVGF
TKLCSLSSPLQVVKLLNDLYSLFDHTIQSHDVYKVETIGDAYMVASGLPIRNGAQHADEIATMALHLLSV
TTHFQIGHMPEERLKLRIGLHTGPVVAGVVGITMPRYCLFGDTVNMASRMESSSLPLRIHVSQSTAGALL
AAGGYHLQKRGTISVKGKGEQTTFWLKGKDGFPVPLPEFTEEEAKVSEIL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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