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Report for CCDS8336.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8336.2 Public Homo sapiens 11 CWF19L2 24 110 108 CCDS HistoryNCBI Gene:143884Re-query CCDS DB by CCDS ID:8336.2Re-query CCDS DB by GeneID:143884See the combined annotation on chromosome 11 in Sequence Viewer

Public Note for CCDS 8336.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and homology data.

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 8336.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000282251.10 ENSP00000282251.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000282251.10Link to Ensembl Protein Viewer:ENSP00000282251.5Re-query CCDS DB by Nucleotide ID:ENST00000282251Re-query CCDS DB by Protein ID:ENSP00000282251
Original member Current member NCBI NM_152434.3 NP_689647.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152434.3Link to Protein Sequence:NP_689647.2Re-query CCDS DB by Nucleotide ID:NM_152434Re-query CCDS DB by Protein ID:NP_689647Link to BLAST:NP_689647.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689647.2 894 Q2TBE0-1 894 100% 0 0

Chromosomal Locations for CCDS 8336.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 107326910 107327053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107329918 107330019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107334881 107334961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107336558 107336713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107348937 107349053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107353524 107353736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107390074 107390211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107392779 107392895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107416209 107416298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107418194 107418287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107428799 107429451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107433634 107433749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107439090 107439183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107441503 107441622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107442939 107443049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107454450 107454572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107455666 107455776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 107457712 107457816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2685 nt):
ATGGCAACAAGTATGGCGGCTGCTAGTGGTAGATTTGAAAGTGCGAAGAGTATCGAAGAGCGGAAAGAAC
AGACCCGGAATGCCAGGGCCGAGGTGTTGCGCCAGGCTAAAGCCAATTTTGAAAAAGAAGAAAGGCGTAA
AGAACTTAAGCGACTTCGGGGTGAGGATACATGGATGCTACCTGATGTGAATGAGAGAATTGAACAGTTC
TCACAGGAACACTCTGTGAAGAAAAAGAAGAAAAAAGACAAGCATTCAAAAAAAGCAAAGAAAGAAAAGA
AAAAAAAGAGCAAGAAACAGAAATATGAAAAAAACAATGAGTCATCTGATAGCTCATCAAGCTCTGAAGA
TGAGTGGGTTGAGGCTGTTCCATCCCAGACTCCTGACAAGGAAAAAGCCTGGAAAGTGAAAGATGAAAAG
TCAGGAAAAGATGACACCCAAATTATCAAGAGGGATGAGTGGATGACTGTTGATTTTATGTCTGTTAAAA
CTGTGTCATCATCATCACTCAAAGCTGAAAAGGAAACTATGAGGAAAATAGAGCAAGAGAAAAACCAAGC
GCTTGAACAGTCCAAACTGATGGAAAGAGAATTGAATCCGTACTGGAAGGATGGTGGGACAGGTCTTCCA
CCTGAAGACTGTAGTGTGTCATCGATTACTAAAGTTTCAGTGGTAGAAGATGGTGGATTAAGCTGGCTAA
GGAAATCTTATCTAAGAATGAAGGAACAAGCTGAGAAACAAAGTAGAAACTTTGAGGACATTGTAGCCGA
AAGATATGGGTCAATGGAAATATTTCAGTCAAAATTAGAAGATGCTGAAAAAGCTGCATCCACGAAAGAA
GATTATAGACGGGAACGGTGGAGGAAACCCACATATTCAGATAAAGCACAAAATTGTCAAGAAAGTAGAG
AATCAGACTTAGTAAAATATGGTAACAGTTCAAGGGATAGATATGCTACAACAGATACTGCAAAAAATAG
CAATAATGAAAAATTTATTGGTGATGAAAAAGATAAGAGACCTGGGTCTTTAGAAACGTGTAGAAGAGAA
TCTAACCCAAGGCAAAATCAAGAGTTTTCTTTTGGCAATTTGAGAGCTAAATTCTTGAGACCCTCTGATG
ATGAAGAACTGTCATTTCACAGCAAGGGCAGAAAATTTGAACCACTTAGTTCATCTTCAGCATTGGTAGC
TCAGGGCTCTTTGTGTAGTGGTTTTAGAAAACCCACCAAGAACAGTGAAGAAAGATTAACATCATGGAGT
CGCTCTGATGGGAGAGGAGACAAGAAACATTCAAATCAAAAGCCATCGGAAACCAGTACTGATGAACACC
AACATGTTCCAGAAGACCCAAGAGAAAAATCACAAGATGAAGTCTTGAGAGATGACCCTCCAAAAAAAGA
ACATCTACGGGATACAAAGTCTACATTTGCTGGCAGTCCAGAGCGTGAGTCCATTCACATCCTGAGTGTT
GATGAGAAGAACAAGTTGGGAGCCAAGATTATCAAAGCAGAGATGATGGGGAATATGGAATTAGCTGAAC
AACTTAAAGTTCAACTTGAAAAGGCAAATAAATTCAAAGAAACTATAACACAGATACCAAAAAAATCTGG
GGTAGAGAATGAAGACCAGCAAGAAGTAATCCTTGTCAGAACAGATCAGTCTGGAAGAGTATGGCCTGTG
AACACACCCGGAAAATCTCTGGAATCACAAGGAGGAAGAAGAAAGAGACAGATGGTTTCAACCCATGAGG
AAAGAGAAAGGGTCAGATACTTTCATGATGATGATAATCTAAGCCTAAATGATTTAGTCAAAAATGAAAA
GATGGGAACAGCAGAAAATCAAAACAAGCTCTTTATGAGAATGGCATCTAAGTTTATGGGAAAAACAGAT
GGAGACTATTACACCCTGGATGACATGTTTGTCTCCAAAGCAGCTGAGAGAGAACGTCTTGGTGAAGAGG
AAGAGAACCAAAGGAAAAAAGCTATTGCTGAGCATCGGAGTCTTGCTGCACAAATGGAAAAATGTCTGTA
TTGTTTTGACAGCTCTCAATTTCCCAAGCATCTTATTGTTGCAATAGGTGTTAAGGTTTATTTATGTTTA
CCCAACGTACGGTCTCTTACTGAGGGGCACTGCCTGATAGTCCCTTTGCAGCACCATAGAGCAGCTACTT
TGTTGGATGAAGACATCTGGGAGGAGATCCAGATGTTCAGAAAATCATTGGTAAAGATGTTTGAAGATAA
AGGATTAGACTGCATTTTTTTGGAAACTAATATGAGCATGAAGAAACAGTATCACATGGTTTATGAATGT
ATTCCTCTTCCCAAGGAAGTGGGTGACATGGCTCCCATCTATTTTAAGAAAGCCATAATGGAATCTGATG
AAGAGTGGTCCATGAACAAGAAGTTGATAGATCTCTCTTCAAAAGATATCAGAAAGTCTGTACCCAGAGG
GTTACCTTACTTCTCTGTGGATTTTGGCCTTCACGGAGGGTTTGCCCATGTCATTGAAGATCAGCACAAA
TTCCCTCATTACTTTGGAAAGGAAATCATAGGTGGGATGCTGGATATAGAACCAAGACTTTGGAGGAAAG
GCATCCGAGAAAGCTTTGAGGATCAGAGGAAAAAAGCACTGCAGTTTGCTCAGTGGTGGAAACCATATGA
CTTCACCAAAAGTAAAAACTATTGA

Translation (894 aa):
MATSMAAASGRFESAKSIEERKEQTRNARAEVLRQAKANFEKEERRKELKRLRGEDTWMLPDVNERIEQF
SQEHSVKKKKKKDKHSKKAKKEKKKKSKKQKYEKNNESSDSSSSSEDEWVEAVPSQTPDKEKAWKVKDEK
SGKDDTQIIKRDEWMTVDFMSVKTVSSSSLKAEKETMRKIEQEKNQALEQSKLMERELNPYWKDGGTGLP
PEDCSVSSITKVSVVEDGGLSWLRKSYLRMKEQAEKQSRNFEDIVAERYGSMEIFQSKLEDAEKAASTKE
DYRRERWRKPTYSDKAQNCQESRESDLVKYGNSSRDRYATTDTAKNSNNEKFIGDEKDKRPGSLETCRRE
SNPRQNQEFSFGNLRAKFLRPSDDEELSFHSKGRKFEPLSSSSALVAQGSLCSGFRKPTKNSEERLTSWS
RSDGRGDKKHSNQKPSETSTDEHQHVPEDPREKSQDEVLRDDPPKKEHLRDTKSTFAGSPERESIHILSV
DEKNKLGAKIIKAEMMGNMELAEQLKVQLEKANKFKETITQIPKKSGVENEDQQEVILVRTDQSGRVWPV
NTPGKSLESQGGRRKRQMVSTHEERERVRYFHDDDNLSLNDLVKNEKMGTAENQNKLFMRMASKFMGKTD
GDYYTLDDMFVSKAAERERLGEEEENQRKKAIAEHRSLAAQMEKCLYCFDSSQFPKHLIVAIGVKVYLCL
PNVRSLTEGHCLIVPLQHHRAATLLDEDIWEEIQMFRKSLVKMFEDKGLDCIFLETNMSMKKQYHMVYEC
IPLPKEVGDMAPIYFKKAIMESDEEWSMNKKLIDLSSKDIRKSVPRGLPYFSVDFGLHGGFAHVIEDQHK
FPHYFGKEIIGGMLDIEPRLWRKGIRESFEDQRKKALQFAQWWKPYDFTKSKNY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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