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Report for CCDS93126.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93126.1 Public Homo sapiens 22 YDJC 24 110 108 CCDS HistoryNCBI Gene:150223Re-query CCDS DB by CCDS ID:93126.1Re-query CCDS DB by GeneID:150223See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 93126.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398873.4 ENSP00000381847.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398873.4Link to Ensembl Protein Viewer:ENSP00000381847.3Re-query CCDS DB by Nucleotide ID:ENST00000398873Re-query CCDS DB by Protein ID:ENSP00000381847
Original member Current member NCBI NM_001371350.1 NP_001358279.1 Accepted alive Link to Nucleotide Sequence:NM_001371350.1Link to Protein Sequence:NP_001358279.1Re-query CCDS DB by Nucleotide ID:NM_001371350Re-query CCDS DB by Protein ID:NP_001358279Link to BLAST:NP_001358279.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001358279.1 149 A8MPS7-2 149 100% 0 0

Chromosomal Locations for CCDS 93126.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 21628762 21628787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21629308 21629407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21629602 21629761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 21629851 21630014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (450 nt):
ATGTCCCGCCCTCGCATGCGCCTGGTGGTCACCGCGGACGACTTTGGTTACTGCCCGCGACGCGATGAGG
GTATCGTGGAGGCCTTTCTGGCCGGGGCTGTGACCAGCGTGTCCCTGCTGGTCAACGGTGCGGCCACGGA
GAGCGCGGCGGAGCTGGCCCGCAGGCACAGCATCCCCACGGGCCTCCACGCCAACCTGTCCGAGGGCCGC
CCCGTGGGTCCGGCCCGCCGTGGCGCCTCATCGCTGCTCGGCCCGGAAGGCTTCTTCCTTGGCAAGATGG
GATTCCGGGAGGCGGTGGCGGCCGGAGACGTGGATTTGCCTCAGGTGCGGGAGGAGCTCGAGGCCCAACT
AAGCTGCTTCCGGGAGCTGCTGGGCAGGGCCCCCACGCACGCGGACGGGCACCAGCACGTGCACGTGCTC
CCAGGTGGACAGACGCCTTCGTGGGCCTGA

Translation (149 aa):
MSRPRMRLVVTADDFGYCPRRDEGIVEAFLAGAVTSVSLLVNGAATESAAELARRHSIPTGLHANLSEGR
PVGPARRGASSLLGPEGFFLGKMGFREAVAAGDVDLPQVREELEAQLSCFRELLGRAPTHADGHQHVHVL
PGGQTPSWA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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