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Report for CCDS1835.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1835.1 Public Homo sapiens 2 KCNK12 24 110 108 CCDS HistoryNCBI Gene:56660Re-query CCDS DB by CCDS ID:1835.1Re-query CCDS DB by GeneID:56660See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1835.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327876.5 ENSP00000327611.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327876.5Link to Ensembl Protein Viewer:ENSP00000327611.3Re-query CCDS DB by Nucleotide ID:ENST00000327876Re-query CCDS DB by Protein ID:ENSP00000327611
Original member Current member NCBI NM_022055.2 NP_071338.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022055.2Link to Protein Sequence:NP_071338.1Re-query CCDS DB by Nucleotide ID:NM_022055Re-query CCDS DB by Protein ID:NP_071338Link to BLAST:NP_071338.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071338.1 430 Q9HB15 430 100% 0 0

Chromosomal Locations for CCDS 1835.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 47520907 47521808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 47569941 47570331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1293 nt):
ATGTCCTCCCGCAGCCCCCGGCCCCCGCCCCGCCGTAGCCGCCGCCGCCTGCCGCGCCCCTCCTGCTGCT
GCTGCTGCTGCCGCCGTTCGCACCTCAACGAGGACACCGGCCGCTTCGTGCTGCTGGCGGCGCTCATCGG
CCTCTACCTGGTGGCGGGTGCCACAGTCTTCTCGGCGCTCGAGAGCCCCGGCGAGGCGGAGGCGCGGGCG
CGCTGGGGCGCCACGCTGCGCAACTTCAGCGCTGCGCACGGCGTGGCCGAGCCAGAGCTGCGCGCCTTCC
TCCGGCACTACGAGGCCGCGCTGGCCGCCGGCGTCCGCGCCGACGCGCTGCGCCCGCGCTGGGACTTCCC
CGGCGCCTTCTACTTCGTGGGCACCGTGGTGTCAACCATAGGTTTCGGCATGACCACCCCCGCGACGGTG
GGCGGGAAGGCCTTCCTCATCGCCTACGGGCTGTTCGGCTGCGCTGGGACCATCCTGTTCTTCAACCTCT
TCCTGGAGCGCATCATCTCGCTGCTGGCCTTCATCATGCGCGCCTGCCGGGAGCGCCAGCTGCGCCGCAG
CGGCCTGCTGCCCGCCACCTTCCGCCGCGGCTCCGCGCTCTCGGAGGCCGACAGCCTGGCGGGCTGGAAG
CCCTCGGTGTACCACGTGCTGCTCATCCTGGGCCTGTTCGCCGTGCTGCTGTCCTGCTGCGCCTCGGCCA
TGTACACCAGCGTGGAGGGCTGGGACTACGTGGACTCGCTCTACTTCTGCTTCGTCACCTTCAGCACCAT
CGGCTTCGGGGACCTGGTGAGCAGCCAGCACGCCGCCTACCGGAACCAGGGGCTCTACCGCCTGGGCAAC
TTCCTCTTCATCCTGCTCGGCGTGTGCTGCATTTACTCGCTCTTCAACGTCATCTCCATCCTCATCAAGC
AGGTGCTCAACTGGATGCTGCGCAAGCTGAGCTGCCGCTGCTGCGCGCGCTGCTGCCCGGCTCCTGGCGC
GCCCCTGGCCCGGCGCAATGCCATCACCCCAGGCTCCCGGCTGCGCCGCCGCCTGGCCGCGCTCGGTGCC
GACCCCGCGGCCCGCGACAGCGACGCCGAGGGCCGCCGCCTCTCGGGCGAGCTCATCTCCATGCGCGACC
TCACGGCCTCCAACAAGGTGTCGCTGGCGCTGCTGCAGAAGCAGCTGTCGGAGACGGCCAACGGCTACCC
GCGCAGCGTGTGCGTCAACACGCGCCAGAACGGCTTCTCGGGCGGCGTGGGCGCGCTGGGCATCATGAAC
AACCGGCTGGCCGAGACCAGCGCCTCCAGGTAG

Translation (430 aa):
MSSRSPRPPPRRSRRRLPRPSCCCCCCRRSHLNEDTGRFVLLAALIGLYLVAGATVFSALESPGEAEARA
RWGATLRNFSAAHGVAEPELRAFLRHYEAALAAGVRADALRPRWDFPGAFYFVGTVVSTIGFGMTTPATV
GGKAFLIAYGLFGCAGTILFFNLFLERIISLLAFIMRACRERQLRRSGLLPATFRRGSALSEADSLAGWK
PSVYHVLLILGLFAVLLSCCASAMYTSVEGWDYVDSLYFCFVTFSTIGFGDLVSSQHAAYRNQGLYRLGN
FLFILLGVCCIYSLFNVISILIKQVLNWMLRKLSCRCCARCCPAPGAPLARRNAITPGSRLRRRLAALGA
DPAARDSDAEGRRLSGELISMRDLTASNKVSLALLQKQLSETANGYPRSVCVNTRQNGFSGGVGALGIMN
NRLAETSASR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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