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Report for CCDS30523.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30523.1 Public Mus musculus X Asb11 23 108 98 CCDS HistoryNCBI Gene:68854Re-query CCDS DB by CCDS ID:30523.1Re-query CCDS DB by GeneID:68854See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30523.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033755.5 ENSMUSP00000033755.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033755.5Link to Ensembl Protein Viewer:ENSMUSP00000033755.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000033755Re-query CCDS DB by Protein ID:ENSMUSP00000033755
Original member Current member NCBI NM_026853.2 NP_081129.1 Accepted alive Link to Nucleotide Sequence:NM_026853.2Link to Protein Sequence:NP_081129.1Re-query CCDS DB by Nucleotide ID:NM_026853Re-query CCDS DB by Protein ID:NP_081129Link to BLAST:NP_081129.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081129.1 294 Q9CQ31-2 294 100% 0 0

Chromosomal Locations for CCDS 30523.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 164438126 164438219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164445729 164445808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164450455 164450562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164452899 164453049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164454388 164454522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164455797 164455988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 164458624 164458748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (885 nt):
ATGCTTCAACTAGCTGGTGAAGAAGGTGTCAGAAGGCCTGGACCATGGAAAGAGATTTCTTTTGGGGATT
ATATATGTCACACATTTCAGGGAGACTGCTGGGCTGATCGATCCCCACTCCATGAGGCTGCAGCCCAGGG
ACGCTTACTGGCTCTTAAAACTTTAATTGCGCAAGGCATCAACGTCAATCTTGTAACAATAAACCGGGTC
TCCTCTCTCCATGAGGCATGCCTTGGGGGTCATGTGGCCTGTGCTAAGGCCTTGCTAGAAAACGGTGCAC
ATGTCAATGCCCAGACTGTTCATGGGGCCACTCCCCTCTTCAATGCTTGCTGCAGTGGCAGTGCTGCGTG
TGTCAATGTGCTGTTGGAGTTTGGAGCCAAGGCCCAGCTTGAGATCTACCTGGCTTCACCGATCCACGAA
GCAGTGAAGCGAGGTCACAGAGAGTGCATGGAGATTCTGCTGACAAAGGATGTTAACATTGAGCAAGAGG
TTCCTCAGCTGGGAACGCCTCTGTATGTGGCCTGTACATACCAGAGAGTTGATTGTGTGAAGAAGCTTCT
AGAACTAGGAGCCAGTGTTGACCATGGTCAGTGGCTGGATACCCCACTGCACGCTGCAGTGAGGCAGTCC
AGTGTGGAGGTCATCAATCTGCTCACTGTGTATGGGGCTAACCTGAACCTCAGAAATGCACAGGGCAAAA
GTGCTCTTGACCTTGCAGTGCCCAAAAGTAGTGTGCGGCAGGCTCTCCTGCTCCATGAAGGTCCACCTGC
TCTTTCTCAGCTCTGCCGACTGTGTGTCCGGAAGTGCTTGGGTCGCACGTGTCATCACGCCATCTACGCG
CTAGGCCTGCCAGAATCCCTGGAAAAATTCCTCTTATACCAATAG

Translation (294 aa):
MLQLAGEEGVRRPGPWKEISFGDYICHTFQGDCWADRSPLHEAAAQGRLLALKTLIAQGINVNLVTINRV
SSLHEACLGGHVACAKALLENGAHVNAQTVHGATPLFNACCSGSAACVNVLLEFGAKAQLEIYLASPIHE
AVKRGHRECMEILLTKDVNIEQEVPQLGTPLYVACTYQRVDCVKKLLELGASVDHGQWLDTPLHAAVRQS
SVEVINLLTVYGANLNLRNAQGKSALDLAVPKSSVRQALLLHEGPPALSQLCRLCVRKCLGRTCHHAIYA
LGLPESLEKFLLYQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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