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Report for CCDS26700.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26700.1 Public Mus musculus 13 F2rl1 23 108 98 CCDS HistoryNCBI Gene:14063Re-query CCDS DB by CCDS ID:26700.1Re-query CCDS DB by GeneID:14063See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26700.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022185.9 ENSMUSP00000022185.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022185.9Link to Ensembl Protein Viewer:ENSMUSP00000022185.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022185Re-query CCDS DB by Protein ID:ENSMUSP00000022185
Original member Current member NCBI NM_007974.4 NP_032000.3 Accepted alive Link to Nucleotide Sequence:NM_007974.4Link to Protein Sequence:NP_032000.3Re-query CCDS DB by Nucleotide ID:NM_007974Re-query CCDS DB by Protein ID:NP_032000Link to BLAST:NP_032000.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032000.3 399 P55086 399 100% 0 0

Chromosomal Locations for CCDS 26700.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 95513173 95514281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 95525037 95525127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGCGAAGTCTCAGCCTGGCGTGGCTGCTGGGAGGTATCACCCTTCTGGCGGCCTCGGTCTCCTGCAGCC
GGACCGAGAACCTTGCACCGGGACGCAACAACAGTAAAGGAAGAAGTCTTATTGGCAGATTAGAAACCCA
GCCTCCAATCACTGGGAAAGGGGTTCCGGTAGAACCAGGCTTTTCCATCGATGAGTTCTCTGCGTCCATC
CTCACCGGGAAGCTGACCACGGTCTTTCTTCCGGTCGTCTACATTATTGTGTTTGTGATTGGTTTGCCCA
GTAATGGCATGGCCCTCTGGATCTTCCTTTTCCGAACGAAGAAGAAACACCCCGCCGTGATTTACATGGC
CAACCTGGCCTTGGCCGACCTCCTCTCTGTCATCTGGTTCCCCCTGAAGATCTCCTACCACCTACATGGC
AACAACTGGGTCTACGGGGAGGCCCTGTGCAAGGTGCTCATTGGCTTTTTCTATGGTAACATGTATTGCT
CCATCCTCTTCATGACCTGCCTCAGCGTGCAGAGGTACTGGGTGATCGTGAACCCCATGGGACACCCCAG
GAAGAAGGCAAACATCGCCGTTGGCGTCTCCTTGGCAATCTGGCTCCTGATTTTTCTGGTCACCATCCCT
TTGTATGTCATGAAGCAGACCATCTACATTCCAGCATTGAACATCACCACCTGTCACGATGTGCTGCCTG
AGGAGGTATTGGTGGGGGACATGTTCAATTACTTCCTCTCACTGGCCATTGGAGTCTTCCTGTTCCCGGC
CCTCCTTACTGCATCTGCCTACGTGCTCATGATCAAGACGCTCCGCTCTTCTGCTATGGATGAACACTCA
GAGAAGAAAAGGCAGAGGGCTATCCGACTCATCATCACCGTGCTGGCCATGTACTTCATCTGCTTTGCTC
CTAGCAACCTTCTGCTCGTAGTGCATTATTTCCTAATCAAAACCCAGAGGCAGAGCCACGTCTACGCCCT
CTACCTTGTCGCCCTCTGCCTGTCGACCCTCAACAGCTGCATAGACCCCTTTGTCTATTACTTTGTCTCA
AAAGATTTCAGGGATCACGCCAGAAACGCGCTCCTCTGCCGAAGTGTCCGCACTGTGAATCGCATGCAAA
TCTCGCTCAGCTCCAACAAGTTCTCCAGGAAGTCCGGCTCCTACTCTTCAAGCTCAACCAGTGTTAAAAC
CTCCTACTGA

Translation (399 aa):
MRSLSLAWLLGGITLLAASVSCSRTENLAPGRNNSKGRSLIGRLETQPPITGKGVPVEPGFSIDEFSASI
LTGKLTTVFLPVVYIIVFVIGLPSNGMALWIFLFRTKKKHPAVIYMANLALADLLSVIWFPLKISYHLHG
NNWVYGEALCKVLIGFFYGNMYCSILFMTCLSVQRYWVIVNPMGHPRKKANIAVGVSLAIWLLIFLVTIP
LYVMKQTIYIPALNITTCHDVLPEEVLVGDMFNYFLSLAIGVFLFPALLTASAYVLMIKTLRSSAMDEHS
EKKRQRAIRLIITVLAMYFICFAPSNLLLVVHYFLIKTQRQSHVYALYLVALCLSTLNSCIDPFVYYFVS
KDFRDHARNALLCRSVRTVNRMQISLSSNKFSRKSGSYSSSSTSVKTSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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