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Report for CCDS18739.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18739.1 Public Mus musculus 4 Fgr 23 108 98 CCDS HistoryNCBI Gene:14191Re-query CCDS DB by CCDS ID:18739.1Re-query CCDS DB by GeneID:14191See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18739.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030693.12 ENSMUSP00000030693.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030693.12Link to Ensembl Protein Viewer:ENSMUSP00000030693.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000030693Re-query CCDS DB by Protein ID:ENSMUSP00000030693
Original member Current member EBI ENSMUST00000171223.1 ENSMUSP00000128411.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171223.1Link to Ensembl Protein Viewer:ENSMUSP00000128411.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171223Re-query CCDS DB by Protein ID:ENSMUSP00000128411
Original member Current member NCBI NM_010208.4 NP_034338.3 Accepted alive Link to Nucleotide Sequence:NM_010208.4Link to Protein Sequence:NP_034338.3Re-query CCDS DB by Nucleotide ID:NM_010208Re-query CCDS DB by Protein ID:NP_034338Link to BLAST:NP_034338.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034338.3 517 P14234 517 100% 0 0

Chromosomal Locations for CCDS 18739.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 132986163 132986352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132987189 132987291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132988683 132988781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132994647 132994750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132994918 132995067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132997121 132997276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132997392 132997571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132997968 132998044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132998341 132998494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 132999908 133000039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133000135 133000343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1554 nt):
ATGGGCTGTGTGTTCTGCAAGAAGTTGGAGCCTGCATCCAAGGAGGATGTGGGCCTGGAAGGGGACTTCC
GGAGCCAAACGGCTGAAGAACGCTATTTCCCTGACCCCACTCAAGGCCGGACTTCGTCCGTCTTTCCTCA
GCCCACCAGCCCTGCTTTCCTCAACACTGGCAACATGAGAAGCATCTCAGGGACCGGAGTGACCATATTC
GTCGCCCTGTACGACTATGAGGCCAGGACAGGGGATGACCTCACCTTCACCAAAGGCGAGAAGTTCCACA
TCCTGAACAATACGGAGTATGACTGGTGGGAGGCTCGCTCCCTGAGCTCCGGACACAGAGGCTATGTTCC
CAGCAACTATGTTGCTCCTGTGGATTCCATCCAGGCTGAAGAGTGGTACTTCGGAAAGATCAGTAGAAAG
GATGCAGAGAGGCAGCTTCTGTCCTCTGGTAACCCCCAGGGGGCCTTTCTCATTCGGGAAAGCGAGACCA
CCAAAGGGGCCTACTCCCTGTCCATCCGTGACTGGGACCAGAACAGAGGCGATCACATAAAGCATTATAA
GATCCGAAAGCTGGACACGGGCGGCTACTACATCACCACACGGGCCCAGTTTGACTCCATACAGGACCTA
GTGCGGCACTACATGGAAGTGAATGATGGTCTGTGCTACTTGCTTACGGCGCCTTGTACCACCACTAAGC
CCCAGACTCTAGGCCTGGCCAAGGATGCCTGGGAGATCGACCGGAACTCCATAGCACTGGAACGCAGGCT
GGGCACCGGCTGCTTTGGAGATGTGTGGCTGGGCACATGGAACTGCAGCACAAAGGTGGCAGTGAAGACG
CTGAAGCCGGGCACCATGTCCCCGAAGGCATTCCTGGAGGAGGCACAGATCATGAAGCTGCTGAGGCACG
ACAAGCTGGTGCAGCTGTATGCGGTGGTGTCGGAGGAACCCATTTATATTGTGACAGAGTTCATGTGCTA
TGGTAGCTTGCTGGATTTCCTAAAGGATCGAGAAGGTCAGAACTTGATGCTGCCCCATCTAGTGGACATG
GCTGCCCAGGTAGCCGAGGGCATGGCCTACATGGAACGCATGAACTATATCCACCGAGACTTGAGGGCAG
CCAACATCCTGGTGGGGGAATACCTAATATGCAAGATCGCTGACTTCGGGCTGGCACGCCTCATAGAGGA
CAATGAGTATAACCCCCAACAAGGAACCAAGTTCCCCATCAAGTGGACAGCCCCAGAGGCCGCCCTCTTT
GGCAGATTCACTGTCAAATCAGACGTGTGGTCCTTTGGGATTCTGCTCACTGAACTGATCACCAAGGGCA
GAGTTCCCTACCCAGGTATGAACAACCGGGAAGTGTTGGAACAGGTGGAGCATGGCTACCACATGCCGTG
CCCTCCAGGATGTCCTGCATCCCTGTATGAGGTCATGGAGCAGGCGTGGCGCCTGGATCCAGAGGAGAGG
CCCACCTTTGAGTACCTGCAGTCTTTCCTGGAAGACTATTTCACCTCCACAGAACCACAGTACCAGCCTG
GAGACCAGACATAG

Translation (517 aa):
MGCVFCKKLEPASKEDVGLEGDFRSQTAEERYFPDPTQGRTSSVFPQPTSPAFLNTGNMRSISGTGVTIF
VALYDYEARTGDDLTFTKGEKFHILNNTEYDWWEARSLSSGHRGYVPSNYVAPVDSIQAEEWYFGKISRK
DAERQLLSSGNPQGAFLIRESETTKGAYSLSIRDWDQNRGDHIKHYKIRKLDTGGYYITTRAQFDSIQDL
VRHYMEVNDGLCYLLTAPCTTTKPQTLGLAKDAWEIDRNSIALERRLGTGCFGDVWLGTWNCSTKVAVKT
LKPGTMSPKAFLEEAQIMKLLRHDKLVQLYAVVSEEPIYIVTEFMCYGSLLDFLKDREGQNLMLPHLVDM
AAQVAEGMAYMERMNYIHRDLRAANILVGEYLICKIADFGLARLIEDNEYNPQQGTKFPIKWTAPEAALF
GRFTVKSDVWSFGILLTELITKGRVPYPGMNNREVLEQVEHGYHMPCPPGCPASLYEVMEQAWRLDPEER
PTFEYLQSFLEDYFTSTEPQYQPGDQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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