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Report for CCDS59399.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59399.1 Public Homo sapiens 19 EML2 24 110 108 CCDS HistoryNCBI Gene:24139Re-query CCDS DB by CCDS ID:59399.1Re-query CCDS DB by GeneID:24139See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59399.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000587152.6 ENSP00000468312.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000587152.6Link to Ensembl Protein Viewer:ENSP00000468312.1Re-query CCDS DB by Nucleotide ID:ENST00000587152Re-query CCDS DB by Protein ID:ENSP00000468312
Original member Current member NCBI NM_001193268.3 NP_001180197.1 Accepted alive Link to Nucleotide Sequence:NM_001193268.3Link to Protein Sequence:NP_001180197.1Re-query CCDS DB by Nucleotide ID:NM_001193268Re-query CCDS DB by Protein ID:NP_001180197Link to BLAST:NP_001180197.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001180197.1 850 O95834-3 850 100% 0 0

Chromosomal Locations for CCDS 59399.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45609663 45609788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45613541 45613671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45614605 45614700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45615802 45615889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45616461 45616558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45616765 45616853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45617630 45617697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45619060 45619191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45621207 45621332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45621483 45621637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45624719 45624818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45626705 45626839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45629951 45630046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45632861 45632971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45633070 45633139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45634322 45634471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45638505 45638634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45638845 45638873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45641641 45641748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45641918 45642041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45642134 45642352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45645273 45645444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2553 nt):
ATGCTGGAACGAAGGGCGTTGCTATGGCAACGGGAGGCAGGGCCTGGTTGGGGGGACCGGGCCCGGGCTG
GGACCGGGGGGGCCGGCGGTGGCTGTGGTGGGGCGATGGCGGAGCGCGGCCCGGCCTTCTGCGGCCTGTA
CGACACGTCCTCGCTGCTGCGATACTGCAACGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGAC
GACCGCGTGTCGGCGCTGGAGCAGCGGCTGCAGTTACAGGAAGACGAGCTGGCGGTCCTAAAGGCGGCGC
TGGCGGATGCTCTGCGTCGCCTGCGGGCATGCGAAGAACAGGGAGCGGCGCTACGCGCGCGGGGCACCCC
CAAGGGCCGGGCGCCTCCGCGCTTAGGCACCACTGCCTCGGTGTGTCAGCTCTTGAAAGGCCTTCCCACC
AGGACGCCCCTTAATGGCTCGGGACCCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCA
AGAAGGAGGCGACCTCCGGGCGCAGCAGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCCTCGGTGCG
CCGTGAGGACCCCCGCAGCCGGACCACATCCTCCAGCAGCAACTGTAGCGCCAAAAAGGAAGGCAAAACC
AAAGAAGTTATCTTCAGTGTGGAGGATGGCTCCGTGAAAATGTTCCTGAGGGGCCGCCCTGTGCCCATGA
TGATCCCAGACGAGCTGGCACCCACCTACAGCCTGGACACACGCTCGGAGCTGCCTTCTTGCCGGCTCAA
GCTGGAGTGGGTCTATGGCTACCGTGGCCGAGACTGCCGGGCCAACCTTTATTTGCTGCCCACCGGGGAG
ATAGTGTACTTTGTGGCCTCCGTAGCCGTGCTATACAGCGTGGAGGAGCAGAGGCAGCGACACTACCTGG
GACACAACGATGACATCAAATGCTTGGCCATCCACCCAGATATGGTCACCATCGCCACGGGACAGGTGGC
GGGAACCACTAAGGAAGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC
TTACACGTGCTGGGCTTGGGGGTGTTTGACAGAGCCGTGTGCTGTGTGGGCTTCTCCAAATCTAATGGAG
GCAACCTGCTGTGTGCAGTGGATGAATCCAATGATCACATGCTCTCGGTGTGGGACTGGGCCAAGGAGAC
CAAGGTGGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGGACCCCACT
GTGCTTATCACCTGCGGGAAATCTCACATCTACTTCTGGACCTTGGAGGGGGGCAGCTTGAGCAAGCGGC
AAGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGT
GGTCACGGGGGACTCTGGGGGGAACCTCTATGTTTGGGGCAAAGGTGGGAACCGTATCACACAGGCGGTG
CTGGGCGCCCACGACGGCGGCGTGTTTGGGCTCTGCGCCCTGCGGGACGGGACGCTGGTGTCTGGAGGGG
GCCGTGATCGGCGGGTGGTCCTCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGGAGGTCCCTGAGGA
CTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCC
ATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTGGGGCC
TGGCCACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTC
AGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGT
GGCTCTGTCCTGGCTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
TGGCTATCCACACAGACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
CGTGGGCTCCCACGACAACTTGGTGTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTG
GGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCA
CCAACTCCGGGGACTATGAGATTCTGTACTGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGC
TGTGAGGAACATGGAATGGGCCACAGCTACTTGTGTCCTAGGGTTTGGGGTGTTTGGGATCTGGTCTGAG
GGGGCGGACGGCACTGATATCAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCTGGCTTCAGCTGATG
ACTTTGGCAAAGTTCACCTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTACGGTGG
ACACAGCAGCCATGTGACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAG
GACACCAGTGTGCTACAGTGGCGGGTGGTCTGA

Translation (850 aa):
MLERRALLWQREAGPGWGDRARAGTGGAGGGCGGAMAERGPAFCGLYDTSSLLRYCNDDNLSGTSGMEVD
DRVSALEQRLQLQEDELAVLKAALADALRRLRACEEQGAALRARGTPKGRAPPRLGTTASVCQLLKGLPT
RTPLNGSGPPRRVGGYATSPSSPKKEATSGRSSVRRYLSPERLASVRREDPRSRTTSSSSNCSAKKEGKT
KEVIFSVEDGSVKMFLRGRPVPMMIPDELAPTYSLDTRSELPSCRLKLEWVYGYRGRDCRANLYLLPTGE
IVYFVASVAVLYSVEEQRQRHYLGHNDDIKCLAIHPDMVTIATGQVAGTTKEGKPLPPHVRIWDSVSLST
LHVLGLGVFDRAVCCVGFSKSNGGNLLCAVDESNDHMLSVWDWAKETKVVDVKCSNEAVLVATFHPTDPT
VLITCGKSHIYFWTLEGGSLSKRQGLFEKHEKPKYVLCVTFLEGGDVVTGDSGGNLYVWGKGGNRITQAV
LGAHDGGVFGLCALRDGTLVSGGGRDRRVVLWGSDYSKLQEVEVPEDFGPVRTVAEGHGDTLYVGTTRNS
ILQGSVHTGFSLLVQGHVEELWGLATHPSRAQFVTCGQDKLVHLWSSDSHQPLWSRIIEDPARSAGFHPS
GSVLAVGTVTGRWLLLDTETHDLVAIHTDGNEQISVVSFSPDGAYLAVGSHDNLVYVYTVDQGGRKVSRL
GKCSGHSSFITHLDWAQDSSCFVTNSGDYEILYWDPATCKQITSADAVRNMEWATATCVLGFGVFGIWSE
GADGTDINAVARSHDGKLLASADDFGKVHLFSYPCCQPRALSHKYGGHSSHVTNVAFLWDDSMALTTGGK
DTSVLQWRVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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