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Report for CCDS57962.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57962.1 Public Homo sapiens 1 ANKRD65 24 110 108 CCDS HistoryNCBI Gene:441869Re-query CCDS DB by CCDS ID:57962.1Re-query CCDS DB by GeneID:441869See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57962.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000442470.1 ENSP00000428201.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000442470.1Link to Ensembl Protein Viewer:ENSP00000428201.1Re-query CCDS DB by Nucleotide ID:ENST00000442470Re-query CCDS DB by Protein ID:ENSP00000428201
Original member Current member EBI ENST00000427211.3 ENSP00000428419.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000427211.3Link to Ensembl Protein Viewer:ENSP00000428419.1Re-query CCDS DB by Nucleotide ID:ENST00000427211Re-query CCDS DB by Protein ID:ENSP00000428419
Original member Current member NCBI NM_001243535.2 NP_001230464.1 Accepted alive Link to Nucleotide Sequence:NM_001243535.2Link to Protein Sequence:NP_001230464.1Re-query CCDS DB by Nucleotide ID:NM_001243535Re-query CCDS DB by Protein ID:NP_001230464Link to BLAST:NP_001230464.1
Original member Current member NCBI NM_001375659.1 NP_001362588.1 Accepted alive Link to Nucleotide Sequence:NM_001375659.1Link to Protein Sequence:NP_001362588.1Re-query CCDS DB by Nucleotide ID:NM_001375659Re-query CCDS DB by Protein ID:NP_001362588Link to BLAST:NP_001362588.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230464.1 174 E5RJM6-2 174 100% 0 0
NP_001362588.1 174 E5RJM6-2 174 100% 0 0

Chromosomal Locations for CCDS 57962.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 1419234 1419549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 1420797 1421005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (525 nt):
ATGGACTCCCAGAGGCCTGAGCCCAGAGAGGAGGAGGAGGAGGAACAGGAACTGCGGTGGATGGAGCTGG
ACTCCGAAGAGGCCCTGGGAACCAGGACAGAGGGGCCTAGTGTTGTCCAGGGCTGGGGGCACCTGCTCCA
GGCCGTGTGGAGGGGCCCTGCAGGCCTGGTGACGCAGCTGCTGCGGCAAGGTGCCAGCGTGGAGGAGAGG
ACATTGAGGTGCTGCTGGGCCACGGGGCAGACCCAGGCATCAGGGACAGGCATGGCCGCTCTGCGCTGCA
CAGGGCTGCCGCCCGAGGACACCTGCTTGCCGTCCAGTTGCTGGTCACCCAGGGGGCCGAGGTGGATGCG
CGGGACACCCTGGGCCTCACACCCCTGCATCACGCCTCTCGGGAAGGCCACGTGGAGGTTGCCGGCTGCC
TGCTGGACAGGGGTGCCCAGGTGGATGCTACCGGCTGGCTCCGAAAGACCCCCCTACACCTGGCTGCAGA
GCGAGGGCATGGGCCTACCGTGGGGCTTCTGCTGA

Translation (174 aa):
MDSQRPEPREEEEEEQELRWMELDSEEALGTRTEGPSVVQGWGHLLQAVWRGPAGLVTQLLRQGASVEER
TLRCCWATGQTQASGTGMAALRCTGLPPEDTCLPSSCWSPRGPRWMRGTPWASHPCITPLGKATWRLPAA
CWTGVPRWMLPAGSERPPYTWLQSEGMGLPWGFC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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