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Report for CCDS54259.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54259.1 Public Homo sapiens 19 ZNF607 24 110 108 CCDS HistoryNCBI Gene:84775Re-query CCDS DB by CCDS ID:54259.1Re-query CCDS DB by GeneID:84775See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54259.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395835.7 ENSP00000438015.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395835.7Link to Ensembl Protein Viewer:ENSP00000438015.1Re-query CCDS DB by Nucleotide ID:ENST00000395835Re-query CCDS DB by Protein ID:ENSP00000438015
Original member Current member NCBI NM_001172677.1 NP_001166148.1 Accepted alive Link to Nucleotide Sequence:NM_001172677.1Link to Protein Sequence:NP_001166148.1Re-query CCDS DB by Nucleotide ID:NM_001172677Re-query CCDS DB by Protein ID:NP_001166148Link to BLAST:NP_001166148.1
Original member Current member NCBI NM_001375895.1 NP_001362824.1 Accepted alive Link to Nucleotide Sequence:NM_001375895.1Link to Protein Sequence:NP_001362824.1Re-query CCDS DB by Nucleotide ID:NM_001375895Re-query CCDS DB by Protein ID:NP_001362824Link to BLAST:NP_001362824.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166148.1 695 Q96SK3-3 695 100% 0 0
NP_001362824.1 695 Q96SK3-3 695 100% 0 0

Chromosomal Locations for CCDS 54259.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 37698040 37699895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37707914 37708009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37709696 37709822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 37711610 37711618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2088 nt):
ATGTCCTATGGATCAATAACATTCGGGGATGTGGCCATAGACTTCTCTCATCAGGAGTGGGAATATCTCA
GCCTGGTTCAGAAGACCTTGTACCAGGAGGTGATGATGGAGAACTATGACAACTTAGTCTCATTGGGACA
TTCCGTATCTAAGCCAGATTTAATCACCTTATTGGAGCAAGGAAAAGAGCCATGGATGATTGTGAGGGAA
GAAACAAGAGGAGAGTGTACAGATTTGGATTCAAGATGTGAAATAATCAGCGATGGGAAAATGCAGCTTT
ATAGGAAACACTCATGTGTTACTCTCCATCAGAGAATTCATAATGGACAGAAACCATATGAGTGTAAGCA
ATGTCAGAAGTCCTTTAGTCATCTTACAGAACTCATGGTACATCAAACAATTCATACTAGTGAGGAACCT
GATCAATGTGAAAAGTTTAGGAAGGCATTTAGCCATCTTACAGACCTTAGAAAGCATCAGAAAATTAATG
CTCGTGAGAAACCTTATGAATGTGAAGAATGTGGGAAGGTCTTCAGTTATCCTGCAAACCTTGCTCAACA
TGGGAAAGTTCATGTTGAGAAACCCTATGAATGTAAAGAGTGTGGGGAAGCTTTTAGGACTAGCCGTCAA
CTTACTGTACATCATAGATTTCATTATGGTGAGAAACCCTACGAATGTAAGGAATGTGGCAAGGCCTTTA
GTGTGTATGGACGACTTAGTCGACATCAGAGTATTCACACTGGTGAGAAGCCCTTTGAATGTAACAAATG
TGGGAAGTCCTTTAGGCTCAAAGCAGGCCTTAAAGTACATCAGAGTATTCATACTGGAGAGAAGCCACAT
GAATGTAAGGAATGTGGAAAGGCCTTTCGTCAGTTTTCCCACCTTGTGGGTCATAAAAGAATTCATACTG
GAGAAAAACCCTATGAATGCAAGGAATGCGGGAAGGGCTTTACATGTAGGTATCAACTTACCATGCATCA
GAGAATTTATTCAGGGGAGAAACACTATGAATGTAAAGAAAATGGGGAGGCTTTTAGTAGTGGCCATCAA
CTTACTGCACCTCATACATTTGAAAGTGTTGAGAAACCTTATAAGTGTGAGGAATGTGGGAAAGCCTTTA
GTGTGCATGGACGACTTACTCGACATCAGGGTATTCATAGTGGTAAGAAACCCTATGAATGTAACAAATG
TGGGAAGTCCTTTAGGCTCAATTCATCCCTTAAAATACATCAAAATATTCATACCGGTGAGAAACCCTAC
AAATGTAAGGAATGTGGGAAGGCCTTCAGTCAGCGTGCACACCTTGCCCATCATAACAGAATTCATACTG
GTTACAAACCCTTTGAATGTAAAGAATGTGGGAAGTCCTTTCGTTGTGCCTCATATCTTGTTATACATGA
GAGAATTCATACAGGAGAGAAACCCTATGTATGTCAAGAGTGTGGGAAGGGTTTTAGTTATAGCCATAAA
CTCACTATACATCGCAGAGTTCATACTGGTGAGAAACCTTATGAATGTAAGGAATGTGGGAAGGCCTTTA
GTGTATCTGGACAACTTACTCAGCATCTGAGTATTCACAGTGGTAAGAAACCCTTTGAATGCAACAAATG
CGGGAAGTCTTTTAGGTTCATTTCTGTACTTAAAGCCCATCAGAATATTCATAGCGCTGAGAAACCCTAC
GAATGTAAGGAATGTGGCAAGGCCTTTCGTCATGCCACAAGCCTCATATATCATGACCGAACTCATGCTG
GTGAAAAGTCCTATGAATGTAAAGAATGTGGGGAAACTTTTAGTCATGCTTCACATCTTATTATTCATGA
GAGAATTCATACCAGTGATAAACCCTATGAATGTAAAAGATGTGGGAAGGCATTTCACTGTGCCTCATAT
CTTGTTAGACATGAAAGCGTTCATGCTGATGGAAATCCCTATATGTGTGAAGAGTGTGGGAAAGCTTTTA
ATAGTAGCCATGAACTTAGTATACATCATAGAGTTCATACTGGTGAGAAACCCTTTAAATGTAACAAATG
CAGAAGGTCCTTTAGGCTTAGATCCATCCTTGAAGTACATCAGAGAATTCATATTTGA

Translation (695 aa):
MSYGSITFGDVAIDFSHQEWEYLSLVQKTLYQEVMMENYDNLVSLGHSVSKPDLITLLEQGKEPWMIVRE
ETRGECTDLDSRCEIISDGKMQLYRKHSCVTLHQRIHNGQKPYECKQCQKSFSHLTELMVHQTIHTSEEP
DQCEKFRKAFSHLTDLRKHQKINAREKPYECEECGKVFSYPANLAQHGKVHVEKPYECKECGEAFRTSRQ
LTVHHRFHYGEKPYECKECGKAFSVYGRLSRHQSIHTGEKPFECNKCGKSFRLKAGLKVHQSIHTGEKPH
ECKECGKAFRQFSHLVGHKRIHTGEKPYECKECGKGFTCRYQLTMHQRIYSGEKHYECKENGEAFSSGHQ
LTAPHTFESVEKPYKCEECGKAFSVHGRLTRHQGIHSGKKPYECNKCGKSFRLNSSLKIHQNIHTGEKPY
KCKECGKAFSQRAHLAHHNRIHTGYKPFECKECGKSFRCASYLVIHERIHTGEKPYVCQECGKGFSYSHK
LTIHRRVHTGEKPYECKECGKAFSVSGQLTQHLSIHSGKKPFECNKCGKSFRFISVLKAHQNIHSAEKPY
ECKECGKAFRHATSLIYHDRTHAGEKSYECKECGETFSHASHLIIHERIHTSDKPYECKRCGKAFHCASY
LVRHESVHADGNPYMCEECGKAFNSSHELSIHHRVHTGEKPFKCNKCRRSFRLRSILEVHQRIHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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