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Report for CCDS31628.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31628.1 Public Homo sapiens 11 PPFIA1 24 110 108 CCDS HistoryNCBI Gene:8500Re-query CCDS DB by CCDS ID:31628.1Re-query CCDS DB by GeneID:8500See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31628.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389547.7 ENSP00000374198.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000389547.7Link to Ensembl Protein Viewer:ENSP00000374198.3Re-query CCDS DB by Nucleotide ID:ENST00000389547Re-query CCDS DB by Protein ID:ENSP00000374198
Original member Current member NCBI NM_177423.3 NP_803172.1 Accepted alive Link to Nucleotide Sequence:NM_177423.3Link to Protein Sequence:NP_803172.1Re-query CCDS DB by Nucleotide ID:NM_177423Re-query CCDS DB by Protein ID:NP_803172Link to BLAST:NP_803172.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_803172.1 1185 Q13136-2 1185 100% 0 0

Chromosomal Locations for CCDS 31628.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 70272173 70272436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70324402 70324503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70324847 70325011 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70325500 70325574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70326262 70326363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70326597 70326818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70330173 70330319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70331960 70332094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70333470 70333553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70335563 70335694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70337365 70337427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70338374 70338453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70339171 70339306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70343669 70343892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70348189 70348420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70354301 70354452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70355639 70355811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70356161 70356254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70362095 70362176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70362288 70362488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70372215 70372390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70372477 70372574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70374918 70375093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70376532 70376600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70378030 70378203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3558 nt):
ATGATGTGCGAGGTGATGCCGACCATCAGCGAAGCAGAAGGCCCCCCTGGAGGAGGTGGAGGCCATGGTT
CC
GGCTCCCCTTCACAGCCAGATGCAGATTCACATTTTGAACAGTTGATGGTCTCCATGCTAGAAGAAAG
G
GACCGCCTTCTTGATACACTGAGAGAGACTCAAGAAACGCTGGCCTTAACCCAGGGGAAGTTACACGAG
GTT
GGTCATGAAAGAGATTCCTTGCAGAGACAGCTCAACACGGCACTTCCACAGGAGTTCGCAGCACTTA
CT
AAAGAACTCAATGTATGCAGGGAACAGCTCCTTGAAAGGGAAGAAGAAATTGCTGAACTGAAAGCAGA
A
AGGAATAACACCAGGCTGCTGTTAGAGCATTTGGAATGCCTTGTCTCCAGGCATGAGCGGTCTCTTAGG
ATG
ACCGTGGTGAAGAGACAAGCGCAGTCTCCAGCAGGCGTGTCCAGCGAAGTGGAAGTGCTGAAAGCAC
TG
AAGTCCTTATTTGAACACCACAAAGCTCTGGATGAAAAGGTGAGAGAGCGATTACGAGTAGCACTTGA
A
AGATGTAGTTTGTTAGAAGAGGAATTAGGTGCCACACACAAAGAGCTAATGATTCTTAAAGAACAGAAT
AAT
CAGAAAAAAACTCTAACAGATGGAGTGCTGGACATAAACCATGAACAAGAAAATACACCAAGCACGA
GT
GGAAAGAGATCTTCTGATGGTTCTTTAAGCCACGAGGAAGACCTTGCTAAAGTAATTGAGCTCCAAGA
A
ATCATAAGTAAGCAGTCAAGGGAACAGAGCCAAATGAAAGAACGCCTGGCTTCCCTTTCCAGTCATGTG
ACA
GAACTGGAAGAGGATCTGGACACGGCTAGAAAAGATCTCATCAAATCTGAAGAAATGAACACAAAAT
TG
CAACGAGATGTCCGTGAAGCCATGGCCCAAAAGGAAGATATGGAAGAGAGAATCACTACTCTTGAAAA
A
CGCTACCTCGCTGCACAGCGTGAAGCCACATCTGTGCATGACCTCAATGATAAACTTGAAAATGAAATT
GCA
AATAAAGATTCTATGCATCGACAGACTGAAGATAAAAACCGCCAGTTACAGGAGCGCTTGGAATTGG
CA
GAGCAAAAGCTGCAACAGACACTGAGGAAGGCAGAGACGCTCCCGGAGGTGGAGGCGGAGCTGGCCCA
G
AGGGTGGCAGCGCTTTCCAAGGCTGAAGAGAGACACGGCAACATTGAAGAAAGGTTACGACAGATGGAA
GCA
CAGTTGGAGGAGAAGAATCAAGAACTGCAGCGGGCAAGGCAAAGAGAAAAAATGAACGAAGAACATA
AT
AAACGTTTATCAGACACTGTTGACAAGCTGCTTTCAGAATCTAATGAGAGGCTTCAACTTCATCTTAA
A
GAGAGAATGGCTGCTTTGGAAGATAAGAACTCTCTTTTAAGAGAAGTTGAAAGTGCAAAAAAGCAGTTA
GAA
GAAACACAACACGATAAGGATCAGCTTGTCCTAAACATTGAAGCACTGAGGGCTGAACTAGACCACA
TG
AGACTAAGAGGTGCTTCACTTCATCATGGCCGACCCCACTTGGGCAGTGTCCCAGATTTCAGGTTCCC
C
ATGGCAGACGGCCACACAGACTCCTACAGCACCAGTGCAGTGCTGCGGCGCCCACAGAAAGGCCGGCTG
GCA
GCCCTGCGAGATGAGCCTTCCAAGGTACAAACTCTTAATGAGCAGGATTGGGAACGTGCCCAGCAAG
CT
AGTGTCTTGGCAAATGTAGCACAAGCATTCGAGAGTGATGCTGACGTGTCTGATGGTGAAGATGACAG
G
GACACTCTCCTCAGCTCAGTTGACCTGCTATCGCCCAGCGGGCAGGCCGACGCGCACACACTAGCCATG
ATG
CTTCAGGAGCAGCTGGACGCCATCAACAAAGAGATCAGGTTGATTCAGGAAGAAAAAGAAAATACAG
AG
CAGCGGGCAGAGGAGATTGAAAGTCGAGTTGGCAGTGGAAGTCTAGACAATCTTGGTCGTTTTAGATC
A
ATGAGCTCCATTCCCCCCTACCCTGCTTCCTCGCTTGCTAGCTCCTCCCCTCCGGGCAGTGGGCGCTCC
ACC
CCACGAAGGATCCCTCACAGCCCAGCTCGGGAAGTGGACAGACTGGGCGTCATGACCCTTTTGCCAC
CT
TCCAGAGAAGAGGTACGAGATGACAAGACAACCATAAAGTGTGAAACCTCCCCGCCTTCCTCCCCGAG
A
GCCCTTCGGTTAGACCGGCTGCACAAAGGGGCGCTGCACACCGTCAGCCACGAGGACATCAGGGACATA
AGG
AACTCCACAGGCTCCCAGGATGGTCCCGTGAGCAACCCCAGCAGTAGCAACAGTAGCCAGGACTCGC
TC
CACAAAGCCCCAAAGAAGAAAGGCATTAAGTCCTCCATTGGCCGCTTGTTTGGCAAGAAAGAAAAGGG
C
CGACCTGGACAAACTGGCAAAGAAGCATTAGGACAAGCTGGTGTTTCCGAGACGGATAACTCATCTCAG
GAT
GCCTTGGGACTTAGCAAATTGGGGGGACAGGCTGAAAAAAATCGTAAACTTCAAAAAAAGCATGAAT
TG
CTGGAGGAAGCCCGGAGACAAGGTTTACCTTTTGCCCAATGGGACGGGCCAACGGTTGTGGTCTGGCT
A
GAGCTCTGGGTTGGGATGCCAGCCTGGTATGTGGCTGCCTGCCGAGCAAACGTGAAAAGCGGGGCCATC
ATG
TCGGCCCTGTCCGACACAGAGATCCAGCGTGAGATTGGCATCAGCAACCCCCTGCACAGGCTGAAGC
TG
AGGCTGGCCATCCAGGAGATCATGTCGCTGACCAGCCCGTCTGCCCCGCCCACATCTAGAACGACACT
C
GCCTATGGGGACATGAACCACGAGTGGATCGGCAACGAGTGGCTCCCCAGCCTGGGCCTCCCCCAGTAC
CGC
AGCTACTTCATGGAGTGCCTTGTAGACGCCAGGATGCTGGACCACTTGACCAAGAAAGACCTTCGAG
GG
CAGCTGAAAATGGTCGACAGTTTTCACAGAAACAGTTTCCAGTGTGGAATTATGTGCCTGAGAAGGTT
A
AATTATGACCGGAAAGAACTGGAAAGAAAAAGAGAAGAAAGTCAGAGTGAAATAAAAGACGTGCTTGTT
TGG
AGCAATGATCGAGTGATTCGCTGGATCCTGTCAATTGGCCTTAAAGAATATGCAAACAATCTTATAG
AG
AGTGGTGTTCACGGAGCACTTCTGGCCTTAGATGAAACCTTCGACTTCAGTGCACTGGCACTGCTGTT
A
CAGATCCCGACGCAGAACACACAGGCTCGTGCTGTCTTGGAAAGAGAATTTAACAACCTTTTGGTCATG
GGG
ACTGATAGAAGGTTTGATGAAGATGATGATAAAAGCTTTAGGAGAGCACCTTCATGGAGAAAAAAGT
TT
AGACCAAAGGACATTCGTGGCTTAGCTGCTGGGTCAGCAGAGACTCTCCCTGCAAACTTCCGGGTGAC
T
TCTTCTATGTCTTCCCCCTCTATGCAGCCAAAGAAGATGCAGATGGACGGTATGTGA


Translation (1185 aa):
MMCEVMPTISEAEGPPGGGGGHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHE
V
GHERDSLQRQLNTALPQ
EFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLR
M
TVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEK
VRERLRVALERCSLLEEELGATHKELMILKEQN
N
QKKTLTDGVLDINHEQENTPSTSGK
RSSDGSLSHEEDLAKVIELQEIISKQSREQSQMKERLASLSSHV
T
ELEEDLDTARKDLIKSEEMNTKLQRDVRE
AMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEI
A
NKDSMHRQ
TEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQME
A
QLEEKNQELQR
ARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVESAKKQL
E
ETQHDK
DQLVLNIEALRAELDHMRLRGASLHHGRPHLGSVPDFRFPMADGHTDSYSTSAVLRRPQKGRL
A
ALRDEPSK
VQTLNEQDWERAQQASVLANVAQAFESDADVSDGEDDRDTLLSSVDLLSPSGQADAHTLAM
M
LQEQLDAINKEI
RLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLASSSPPGSGRS
T
PRRIPHSPAREVDRLGVMTL
LPPSREEVRDDKTTIKCETSPPSSPRALRLDRLHKGALHTVSHEDIRDI
R
NSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKEALGQAGVSETDNSSQ
D
ALGLSKLGGQAEKNRKLQK
KHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAI
M
SALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRT
TLAYGDMNHEWIGNEWLPSLGLPQY
R
SYFMECLVDARMLDHLTKKDLRGQLKMVDSFH
RNSFQCGIMCLRRLNYDRKELERKREESQSEIKDVLV
W
SNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQ
ARAVLEREFNNLLVM
G
TDRRFDE
DDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDGM



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser