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Report for CCDS36813.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36813.1 Public Mus musculus 14 Nid2 23 108 98 CCDS HistoryNCBI Gene:18074Re-query CCDS DB by CCDS ID:36813.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36813.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022340.4 ENSMUSP00000022340.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022340.4Link to Ensembl Protein Viewer:ENSMUSP00000022340.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000022340Re-query CCDS DB by Protein ID:ENSMUSP00000022340
Original member Current member NCBI NM_008695.2 NP_032721.2 Accepted alive Link to Nucleotide Sequence:NM_008695.2Link to Protein Sequence:NP_032721.2Re-query CCDS DB by Nucleotide ID:NM_008695Re-query CCDS DB by Protein ID:NP_032721Link to BLAST:NP_032721.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032721.2 1403 O88322 1403 100% 0 0

Chromosomal Locations for CCDS 36813.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 19751338 19751565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19752241 19752549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19763666 19763898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19768210 19768937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19777996 19778145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19778738 19778983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19779537 19779737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19781135 19781365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19789671 19789814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19790278 19790406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19791508 19791651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19797164 19797283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19798397 19798645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19802338 19802559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19803049 19803218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19805298 19805427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19805843 19806014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19807927 19808084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19809980 19810103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19810954 19811066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 19811186 19811196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4212 nt):
ATGTTTCGGGACCCGACAGCCGGGTGGCTAACACCGCCATCACCGCTATCGCTGCTGGTGATGCTGTTGC
TGCTGTCGCGAGTCGGGGCTCTGCGTCCCGACGAGCTCTTTCCTTACGGGGAGTCGTGGGGAGACCAGCT
GCTGCCGGAGGGCGACGACGAAAGCTCAGCAGCTGTGAAGCTGGCAATACCCCTGCGTTTCTACGATGCC
CAGTTCAGCAGCCTCTACGTGGGCACCAACGGCATCATCTCCACCCAGGACTTCCCCAGGGAGACTCAAT
ATGTAGATGATGATTTTCCTACTGACTTCCCAGCCATCGCCCCTTTCCTGGCTGACATCGACACTAGTCA
CAGCAGGGGCCGGATCCTGTACCGCGAGGACACCTCCGGAGCTGTGCTGAGCCTGGCTGCCCGCTACGTG
CGCACTGGCTTCCCGCTGTCGGGGTCCAGCTTCACCCCCACCCACGCCTTCCTGGCCACCTGGGAGCACG
TGGGCGCCTACGAGGAGGTCAGTCGCGGGGCTGCGCCGTCAGGAGAGCTGAACACTTTCCAGGCTGTTCT
GGCATCCGATGAATCTGATACCTACGCCCTCTTTCTCTACCCTGCCAATGGCCTTCAGTTCTTTGGAACC
CGCCCCAAAGAGTCCTACAATGTCCAGCTGCAGCTTCCCGCTAGGGTGGGCTTCTGCCGAGGGGAAGCGG
ACGACCTGAAGAGAGAAGCACTGTATTTCAGCCTGACTAACACCGAGCAGTCTGTGAAGAATCTCTACCA
GCTAAGCAACCTGGGGATTCCTGGAGTGTGGGCTTTTCACATCGGCAGCAGGTTTGCCCTGGACAATGTC
CGTCCAGCCACAGTTGGAGGTGACCCTTCCACAGCCCGTTCCTCAGCACTGGAGCACCCCTTCAGCCATG
CTGCAGCCCTGGAGAGCTACACCGAGGACAGTTTCCATTACTACGATGAGAATGAAGAGGATGTTGAGTA
CCCACCAGTTGAACCGGGGGAGGCCCCGGAAGGCCACAGCAGAATTGATGTGTCTTTCAATTCAAAGGCT
GATCCAGGCCTTGTGGACGTCGGCACCTCATCTCCAGGTTCCGACCGCGCTTCTCCTTGGCCATATCCAG
CACCTGGTAACTGGCCATCCTACCGGGAAACAGAATCGGCTTCTTTGGACCCTCAAACCAAACAGGGGCG
GCCGGTGGGAGAGGGAGAGGTTCTGGATTTCAGGGACCCAGCGGAGCTTTTGGACCAGATGGGTACCAGA
GCCCCAGCTCCTCCAGAGGCAGATGCAGCTCTCCTAACTCCAGTCAACGAAGACCTTGGGGGCAGAAACA
CCCAGTCCTATCCAGAGGCAGGGCCAGTGCCTTCAGAGCCAGATGTTCCTGTCCCTCCTCTGGAAGGAGA
AGTCCTTCCTCATTACCCCGAGTCTGGTCACGTTCCGCCCCTGAGAGGAGGGAAGTATGTGATAGGACTG
GAGGACCACGTGGGATCTAATGATCAAGTCTTCACGTATAATGGCGCCAACCTGGAAACCTGCGAACACA
GCCACGGCCGGTGCTCCCAGCATGCCTTCTGCACCGACTACACCACTGGCTTTTGCTGCCACTGCCAGTC
GAGGTTTTACGGAAACGGGAAGCACTGCCTGCCAGAAGGGGCACCTCACCGAGTGAATGGGAAAGTGAGT
GGTCGCCTCCGAGTGGGTCACATTCCTGTGCACTTCACTGACGTGGATCTACACGCTTACATCGTGGGCA
ATGATGGCAGAGCCTACACTGCCATCAGCCATGTCCCACAGCCGGCAGCCCAGGCCCTGCTCCCTGTCCT
GCCCATTGGAGGTCTGTTTGGCTGGCTCTTTGCTTTGGAGAAGCCAGGCTCTGAGAATGGCTTCAGCCTC
ACAGGTGCTACCTTTGTCCATGACGTGGAAGTCACTTTTCACCCTGGAGAGGAGAGGGTTCGTATCACTC
AAACTGCCGAGGGGCTTGACCCAGAAAACTATCTGAGCATTAAGACCAACATTGAAGGCCAGGTGCCCTT
CATCCCAGCGAATTTCACAGCCCACATTACTCCGTACAAAGAGTTTTATCATTACAGGGACTCAGTCGTG
ACGTCCTCCAGTTCCCGAAGTTTCTCTCTCACTTCTGGTTCTATTAACCAAACGTGGTCCTACCACATTG
ACCAGAACATCACTTACCAGGCGTGCAGGCACGCCCCCAGACACCTGGCCATCCCTGCCACCCAGCAGCT
GACTGTCGACCGGGCCTTTGCTTTGTACAGTGAGGATGAGGGCGTGCTGAGGTTTGCTGTGACCAATCAG
ATTGGCCCTGTTGAAGTGGACTCAGCCCCTGTTGGAGTGAATCCTTGCTACGACGGAAGCCACACCTGTG
ACACAACAGCAAGGTGCCACCCGGGAACAGGTGTAGACTACACCTGCGAGTGCACGCCTGGGTTCCAGGG
TGACGGACGGAGCTGTGTGGATGTCAATGAGTGTGCCACTGGCTTCCACCGCTGTGGCCCTAATTCTGTG
TGTGTCAACTTGGTGGGAAGCTACAGGTGTGAATGCCGCAGTGGCTATGAATTTGCAGATGACCAGCACA
CTTGTATCTTGATCGCCCCACCTCCCAACCCTTGCCTCGATGGCAGTCACACCTGTGCCCCTGAGGGGCA
AGCCAGGTGCATTCACCATGGAGGCAGCTCATTCAGTTGTGCCTGCCTGCCAGGCTTCATTGGCACTGGG
CATCAGTGTTCTGATGTTGATGAATGTGCGGAAAACCGATGTCATGAGGCAGCTATCTGCTACAATACCC
CCGGGTCCTTCTCCTGCCGTTGCCAGCCTGGGTATCGAGGGGACGGGTTTCACTGCACCTCTGACACGGT
TCCGGAAGATTCCATCTCAGGACTGAAGCCCTGTGAATACCAGCAGCGCTATGCTCAGACACAGCACGCC
TACCCTGGGTCACGGATCCACATCCCCCAGTGTGATGACCAGGGAAACTTCGTGCCACTGCAGTGCCACG
GCAGCACTGGCTTCTGCTGGTGTGTGGACCGAAATGGCCACGAAGTCCCTGGCACGCAGACTCCACCCGG
CTCCACCCCGCCCCACTGTGGACCACCTCCAGAGCCCACCCAGAGGCCTCGGACTGTCTGTGAGCGTTGG
CGGGAAAGCCTGCTGGAACACTACGGAGGCACACCCAGGGATGACCAGTATGTGCCCCAGTGTGATGACC
TGGGCCACTTCATCCCCCTGCAGTGCCATGGAAAGAGTGATTTCTGTTGGTGTGTGGACAAGGATGGCAG
AGAGCTACAGGGCACGCGCTCACAGCCAGGCACCAGGCCTGCATGCATACCCACCGTCGCTCCACCCGTG
GTCCGGCCCACACCCCGGCCCGATGTGACTCCTCCATCTGTGGGCACCTTCCTGCTCTATGCCCAGGGCC
AACAGATTGGCCACTTGCCCCTCAATGGCAGCAGGCTTCAGAAGGACGCAGCCCGGACCCTGCTGTCACT
GCATGGCTCCATAGTTGTGGGGATTGACTATGACTGCCGGGAGAGGATGGTCTACTGGACAGACGTTGCT
GGTCGGACCATCAGCCGTGCCAGCTTGGAGGCAGGAGCCGAACCCGAGACCATCATTACCTCAGGTTTGA
TAAGCCCGGAAGGACTTGCCATCGACCACTTCCGTAGAACAATGTACTGGACAGATAGTGGCCTGGATAA
GATAGAGCGGGCCGAACTGGATGGTTCCGAGCGGAAAGTCCTCTTCCACACAGATCTGGTGAATCCACGA
GCCATCACTGTGGATCCAATCCGAGGCAACTTGTACTGGACAGACTGGAATAGAGAAGCTCCTAAAATTG
AAACATCATCTTTAGATGGCGAAAACAGAAGGATTCTGATCAACAAAGATATTGGATTACCCAATGGATT
GACCTTTGACCCCTTCTCCAAACTGCTCTGCTGGGCAGATGCAGGAACCAAAAAACTGGAGTGTACACTA
CCCGATGGAACTGGACGACGTGTCATCCAAAACCACCTCAATTACCCCTTCAGCATCGTCAGCTATGCAG
ATCACTTCTACCACACGGACTGGCGGAGGGATGGTGTTATATCAGTGAATAAGGACAGTGGCCAGTTTAC
TGATGAGTTTCTCCCTGAGCAGCGGTCTCATCTCTATGGGATCACTGCAGTCTACCCGTACTGTCCAACA
GGAAGAAAATGA

Translation (1403 aa):
MFRDPTAGWLTPPSPLSLLVMLLLLSRVGALRPDELFPYGESWGDQLLPEGDDESSAAVKLAIPLRFYDA
QFSSLYVGTNGIISTQDFPRETQYVDDDFPTDFPAIAPFLADIDTSHSRGRILYREDTSGAVLSLAARYV
RTGFPLSGSSFTPTHAFLATWEHVGAYEEVSRGAAPSGELNTFQAVLASDESDTYALFLYPANGLQFFGT
RPKESYNVQLQLPARVGFCRGEADDLKREALYFSLTNTEQSVKNLYQLSNLGIPGVWAFHIGSRFALDNV
RPATVGGDPSTARSSALEHPFSHAAALESYTEDSFHYYDENEEDVEYPPVEPGEAPEGHSRIDVSFNSKA
DPGLVDVGTSSPGSDRASPWPYPAPGNWPSYRETESASLDPQTKQGRPVGEGEVLDFRDPAELLDQMGTR
APAPPEADAALLTPVNEDLGGRNTQSYPEAGPVPSEPDVPVPPLEGEVLPHYPESGHVPPLRGGKYVIGL
EDHVGSNDQVFTYNGANLETCEHSHGRCSQHAFCTDYTTGFCCHCQSRFYGNGKHCLPEGAPHRVNGKVS
GRLRVGHIPVHFTDVDLHAYIVGNDGRAYTAISHVPQPAAQALLPVLPIGGLFGWLFALEKPGSENGFSL
TGATFVHDVEVTFHPGEERVRITQTAEGLDPENYLSIKTNIEGQVPFIPANFTAHITPYKEFYHYRDSVV
TSSSSRSFSLTSGSINQTWSYHIDQNITYQACRHAPRHLAIPATQQLTVDRAFALYSEDEGVLRFAVTNQ
IGPVEVDSAPVGVNPCYDGSHTCDTTARCHPGTGVDYTCECTPGFQGDGRSCVDVNECATGFHRCGPNSV
CVNLVGSYRCECRSGYEFADDQHTCILIAPPPNPCLDGSHTCAPEGQARCIHHGGSSFSCACLPGFIGTG
HQCSDVDECAENRCHEAAICYNTPGSFSCRCQPGYRGDGFHCTSDTVPEDSISGLKPCEYQQRYAQTQHA
YPGSRIHIPQCDDQGNFVPLQCHGSTGFCWCVDRNGHEVPGTQTPPGSTPPHCGPPPEPTQRPRTVCERW
RESLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQGTRSQPGTRPACIPTVAPPV
VRPTPRPDVTPPSVGTFLLYAQGQQIGHLPLNGSRLQKDAARTLLSLHGSIVVGIDYDCRERMVYWTDVA
GRTISRASLEAGAEPETIITSGLISPEGLAIDHFRRTMYWTDSGLDKIERAELDGSERKVLFHTDLVNPR
AITVDPIRGNLYWTDWNREAPKIETSSLDGENRRILINKDIGLPNGLTFDPFSKLLCWADAGTKKLECTL
PDGTGRRVIQNHLNYPFSIVSYADHFYHTDWRRDGVISVNKDSGQFTDEFLPEQRSHLYGITAVYPYCPT
GRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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