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Report for CCDS12356.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12356.1 Public Homo sapiens 19 MRPL34 24 110 108 CCDS HistoryNCBI Gene:64981Re-query CCDS DB by CCDS ID:12356.1Re-query CCDS DB by GeneID:64981See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 12356.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252602.2 ENSP00000252602.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252602.2Link to Ensembl Protein Viewer:ENSP00000252602.1Re-query CCDS DB by Nucleotide ID:ENST00000252602Re-query CCDS DB by Protein ID:ENSP00000252602
Original member Current member EBI ENST00000600434.5 ENSP00000469581.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600434.5Link to Ensembl Protein Viewer:ENSP00000469581.1Re-query CCDS DB by Nucleotide ID:ENST00000600434Re-query CCDS DB by Protein ID:ENSP00000469581
Original member Current member EBI ENST00000594999.1 ENSP00000471820.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000594999.1Link to Ensembl Protein Viewer:ENSP00000471820.1Re-query CCDS DB by Nucleotide ID:ENST00000594999Re-query CCDS DB by Protein ID:ENSP00000471820
Original member Current member NCBI NM_001382342.1 NP_001369271.1 Accepted alive Link to Nucleotide Sequence:NM_001382342.1Link to Protein Sequence:NP_001369271.1Re-query CCDS DB by Nucleotide ID:NM_001382342Re-query CCDS DB by Protein ID:NP_001369271Link to BLAST:NP_001369271.1
Original member Current member NCBI NM_001382343.1 NP_001369272.1 Accepted alive Link to Nucleotide Sequence:NM_001382343.1Link to Protein Sequence:NP_001369272.1Re-query CCDS DB by Nucleotide ID:NM_001382343Re-query CCDS DB by Protein ID:NP_001369272Link to BLAST:NP_001369272.1
Original member Current member NCBI NM_001400072.1 NP_001387001.1 Accepted alive Link to Nucleotide Sequence:NM_001400072.1Link to Protein Sequence:NP_001387001.1Re-query CCDS DB by Nucleotide ID:NM_001400072Re-query CCDS DB by Protein ID:NP_001387001Link to BLAST:NP_001387001.1
Original member Current member NCBI NM_001400073.1 NP_001387002.1 Accepted alive Link to Nucleotide Sequence:NM_001400073.1Link to Protein Sequence:NP_001387002.1Re-query CCDS DB by Nucleotide ID:NM_001400073Re-query CCDS DB by Protein ID:NP_001387002Link to BLAST:NP_001387002.1
Original member Current member NCBI NM_023937.4 NP_076426.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_023937.4Link to Protein Sequence:NP_076426.1Re-query CCDS DB by Nucleotide ID:NM_023937Re-query CCDS DB by Protein ID:NP_076426Link to BLAST:NP_076426.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001369271.1 92 Q9BQ48 92 100% 0 0
NP_001369272.1 92 Q9BQ48 92 100% 0 0
NP_001387001.1 92 Q9BQ48 92 100% 0 0
NP_001387002.1 92 Q9BQ48 92 100% 0 0
NP_076426.1 92 Q9BQ48 92 100% 0 0

Chromosomal Locations for CCDS 12356.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17305893 17305957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17306166 17306379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGGCTGTCTTGGCTGGATCCCTGTTGGGCCCCACGAGTAGGTCGGCAGCGTTGCTGGGTGGCAGGTGGC
TCCAGCCCCGGGCCTGGCTGGGGTTCCCAGACGCCTGGGGCCTCCCCACCCCGCAGCAGGCCCGGGGCAA
GGCTCGCGGGAATGAGTATCAGCCGAGCAACATCAAACGCAAGAACAAGCACGGCTGGGTCCGGCGCCTG
AGCACGCCGGCCGGCGTGCAGGTCATCCTTCGCCGAATGCTCAAGGGCCGCAAGTCGCTGAGCCATTGA

Translation (92 aa):
MAVLAGSLLGPTSRSAALLGGRWLQPRAWLGFPDAWGLPTPQQARGKARGNEYQPSNIKRKNKHGWVRRL
STPAGVQVILRRMLKGRKSLSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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