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Report for CCDS70807.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70807.1 Public Mus musculus 17 Prr3 23 108 98 CCDS HistoryNCBI Gene:75210Re-query CCDS DB by CCDS ID:70807.1Re-query CCDS DB by GeneID:75210See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70807.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000172429.7 ENSMUSP00000129651.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000172429.7Link to Ensembl Protein Viewer:ENSMUSP00000129651.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000172429Re-query CCDS DB by Protein ID:ENSMUSP00000129651
Original member Current member EBI ENSMUST00000173585.1 ENSMUSP00000134373.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000173585.1Link to Ensembl Protein Viewer:ENSMUSP00000134373.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000173585Re-query CCDS DB by Protein ID:ENSMUSP00000134373
Original member NCBI NM_001282012.1 NP_001268941.1 Updated not alive Link to Nucleotide Sequence:NM_001282012.1Link to Protein Sequence:NP_001268941.1Re-query CCDS DB by Nucleotide ID:NM_001282012Re-query CCDS DB by Protein ID:NP_001268941
Current member NCBI NM_001282012.2 NP_001268941.1 Accepted alive Link to Nucleotide Sequence:NM_001282012.2Link to Protein Sequence:NP_001268941.1Re-query CCDS DB by Nucleotide ID:NM_001282012Re-query CCDS DB by Protein ID:NP_001268941Link to BLAST:NP_001268941.1
Original member NCBI NM_001282013.1 NP_001268942.1 Updated not alive Link to Nucleotide Sequence:NM_001282013.1Link to Protein Sequence:NP_001268942.1Re-query CCDS DB by Nucleotide ID:NM_001282013Re-query CCDS DB by Protein ID:NP_001268942
Current member NCBI NM_001282013.2 NP_001268942.1 Accepted alive Link to Nucleotide Sequence:NM_001282013.2Link to Protein Sequence:NP_001268942.1Re-query CCDS DB by Nucleotide ID:NM_001282013Re-query CCDS DB by Protein ID:NP_001268942Link to BLAST:NP_001268942.1
Original member NCBI NM_001282024.1 NP_001268953.1 Updated not alive Link to Nucleotide Sequence:NM_001282024.1Link to Protein Sequence:NP_001268953.1Re-query CCDS DB by Nucleotide ID:NM_001282024Re-query CCDS DB by Protein ID:NP_001268953
Current member NCBI NM_001282024.2 NP_001268953.1 Accepted alive Link to Nucleotide Sequence:NM_001282024.2Link to Protein Sequence:NP_001268953.1Re-query CCDS DB by Nucleotide ID:NM_001282024Re-query CCDS DB by Protein ID:NP_001268953Link to BLAST:NP_001268953.1

Chromosomal Locations for CCDS 70807.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 35973697 35973803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35974523 35974813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 35978381 35978414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (432 nt):
ATGGCTAACGGGAAGCCTGGTGATCCCAAGTCAGCTTTCCACAGGGGTCCTCCAGGATCAAGGGGACGGA
TGATTCCCCCACTGCTGAGTCTCCCGCCTCCTCCCCGGGGTAGAGGCTACATTCGGGGAGGCCTCGGTCC
TCGATCTAGCCCGTATGGTCGTGGTTGGTGGGGTATCAATGCCGAACCTCCTTTTCCTGGGCCAGGCCAT
GGGGGTCCCTCTAGGGAAAGCTTTTACAAAGAGGCGAGAAACCCACGAAGGCTCAGAAGCTGGTCTCTTG
TCAAGAATACCTACCCACCCAAGGACAGCCCCCAGATGATGGAAGACAAGTCTGACCGCCCTGTCTGCCG
ACACTTTTCTAAGAAGGGCCACTGTCGATATGAAGACCATTGTGCCTTCTACCATCCAGGCGTCAACGGA
CCTCCTCTGTGA

Translation (143 aa):
MANGKPGDPKSAFHRGPPGSRGRMIPPLLSLPPPPRGRGYIRGGLGPRSSPYGRGWWGINAEPPFPGPGH
GGPSRESFYKEARNPRRLRSWSLVKNTYPPKDSPQMMEDKSDRPVCRHFSKKGHCRYEDHCAFYHPGVNG
PPL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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