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Report for CCDS92026.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92026.1 Public Homo sapiens 15 MEGF11 24 110 108 CCDS HistoryNCBI Gene:84465Re-query CCDS DB by CCDS ID:92026.1Re-query CCDS DB by GeneID:84465See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92026.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288745.7 ENSP00000288745.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000288745.7Link to Ensembl Protein Viewer:ENSP00000288745.3Re-query CCDS DB by Nucleotide ID:ENST00000288745Re-query CCDS DB by Protein ID:ENSP00000288745
Original member Current member NCBI NM_001385030.1 NP_001371959.1 Accepted alive Link to Nucleotide Sequence:NM_001385030.1Link to Protein Sequence:NP_001371959.1Re-query CCDS DB by Nucleotide ID:NM_001385030Re-query CCDS DB by Protein ID:NP_001371959Link to BLAST:NP_001371959.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001371959.1 969 A6BM72-2 969 100% 0 0

Chromosomal Locations for CCDS 92026.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65897934 65898094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65898728 65898934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65906085 65906141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65913737 65913973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65915470 65915598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65916148 65916276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65916828 65916956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65917966 65918094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65922338 65922472 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65922823 65922969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65928425 65928527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65929720 65929883 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65930823 65930943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65957547 65957721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65964908 65965120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65970553 65970689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65980778 65980898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65982242 65982488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66094402 66094494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 66123899 66123974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2910 nt):
ATGCACACCCCTTCGATCAGATCTATTACACACGATGCACAGACATCCTCAACTGGTTCAAGTGCACCAG
GCACCGCCCTGTGTACGGAGGAGTGTGTGCACGGCCGCTGCGTTTCCCCGGACACCTGCCACTGCGAGCC
TGGCTGGGGAGGGCCCGACTGCTCCAGCGGCTGCGACAGCGACCACTGGGGGCCCCACTGCAGCAACCGG
TGCCAGTGCCAGAACGGCGCCCTGTGTAACCCCATCACAGGCGCCTGCGTGTGCGCCGCCGGCTTCCGTG
GATGGCGCTGCGAGGAGCTCTGCGCACCTGGCACCCACGGCAAGGGATGCCAGCTGCCGTGCCAGTGCCG
ACACGGTGCCAGCTGCGACCCCCGCGCCGGCGAGTGCCTCTGCGCACCTGGCTACACCGGCGTCTACTGC
GAGGAGCTGTGCCCTCCTGGGAGCCATGGAGCTCACTGTGAGCTGCGCTGCCCCTGTCAGAATGGGGGCA
CCTGCCACCACATCACTGGCGAGTGTGCCTGCCCCCCAGGCTGGACGGGAGCAGTGTGTGCCCAGCCCTG
CCCACCAGGGACATTTGGCCAGAACTGCAGCCAGGATTGTCCTTGCCACCATGGAGGGCAGTGTGACCAC
GTGACTGGACAGTGCCACTGTACAGCTGGATACATGGGGGACAGGTGCCAAGAGGAGTGCCCCTTCGGGT
CCTTCGGCTTCCAGTGCTCACAGCACTGTGACTGCCACAATGGGGGGCAGTGTTCACCCACCACGGGTGC
CTGCGAGTGTGAGCCTGGCTACAAGGGCCCACGCTGCCAGGAGCGACTGTGCCCGGAGGGCCTGCATGGC
CCAGGCTGCACCCTGCCCTGCCCCTGTGACGCTGACAACACCATCAGCTGCCACCCAGTAACTGGAGCTT
GTACCTGCCAGCCAGGCTGGTCTGGTCACCACTGCAATGAATCCTGCCCTGTTGGCTACTATGGCGATGG
CTGCCAGCTGCCTTGCACCTGTCAGAATGGCGCCGACTGCCACAGCATCACTGGGGGCTGCACTTGTGCT
CCGGGCTTCATGGGAGAGGTCTGTGCCGTTTCCTGTGCAGCAGGGACCTATGGCCCCAACTGCTCGTCCA
TCTGTAGCTGTAACAATGGTGGCACCTGCTCCCCAGTAGATGGCTCCTGTACCTGCAAGGAAGGGTGGCA
GGGCCTGGACTGCACCCTGCCATGTCCCAGTGGGACGTGGGGCCTGAACTGCAACGAGAGCTGCACCTGT
GCCAATGGGGCAGCCTGCAGCCCCATAGACGGCTCCTGCTCCTGCACTCCTGGCTGGCTGGGAGACACCT
GTGAGCTGCCTTGCCCGGATGGCACATTTGGGCTGAACTGCAGTGAACACTGTGACTGCAGCCATGCTGA
TGGATGTGACCCCGTCACAGGCCACTGCTGCTGCCTGGCCGGATGGACAGGCATCCGCTGTGACAGCACG
TGTCCACCTGGCCGCTGGGGCCCCAACTGCTCTGTCTCCTGCAGCTGTGAGAATGGAGGCTCCTGCTCCC
CAGAGGATGGGAGCTGCGAGTGTGCCCCTGGCTTCCGAGGACCCTTATGCCAGAGAATCTGCCCCCCTGG
GTTCTATGGCCACGGCTGCGCCCAGCCATGCCCCCTCTGCGTGCACAGCAGCAGGCCCTGCCACCACATC
AGCGGCATCTGTGAGTGCCTCCCAGGATTCTCTGGAGCTCTCTGCAACCAAGTGTGTGCTGGAGGATACT
TTGGGCAGGACTGTGCCCAGCTCTGCTCCTGTGCCAACAACGGGACCTGCAGCCCTATCGATGGCTCCTG
CCAGTGCTTTCCTGGATGGATTGGCAAGGACTGCTCACAGGCTTGCCCACCCGGGTTCTGGGGCCCCGCC
TGCTTCCACGCATGCAGCTGCCACAACGGGGCGAGCTGCAGCGCCGAGGACGGGGCCTGCCACTGCACCC
CTGGCTGGACTGGACTCTTCTGCACACAGCGCTGCCCAGCAGCATTTTTTGGGAAGGACTGTGGGCGCGT
ATGCCAGTGTCAGAATGGCGCCAGCTGTGACCACATCAGTGGCAAGTGCACCTGCCGCACAGGCTTCACC
GGGCAACACTGTGAGCAGAGATGTGCCCCAGGAACCTTTGGCTATGGGTGTCAGCAGCTATGTGAGTGCA
TGAACAACTCCACCTGTGACCATGTCACCGGCACCTGTTACTGCAGCCCTGGCTTCAAAGGAATCAGGTG
TGACCAAGCTGCCCTCATGATGGAGGAGCTGAATCCCTACACCAAGATCAGCCCAGCACTGGGTGCAGAG
CGGCACTCGGTGGGTGCTGTCACAGGCATCATGCTCCTGTTATTCCTCATTGTGGTGCTGCTGGGCCTAT
TTGCCTGGCATCGGCGGCGGCAGAAAGAGAAGGGCCGAGACCTGGCTCCCCGTGTCTCCTACACACCTGC
CATGAGGATGACCAGCACCGACTACTCCCTCTCAGGTGCTTGTGGAATGGATAGACGTCAGAACACATAC
ATTATGGACAAAGGCTTCAAAGATTACATGAAAGAATCCGTGTGCAGTTCTAGTACTTGTTCCTTGAATA
GCAGTGAAAACCCTTACGCCACAATTAAGGACCCACCCATCCTCACCTGCAAGCTTCCAGAAAGCAGCTA
TGTAGAAATGAAGTCGCCTGTGCACATGGGGTCTCCGTACACAGATGTGCCATCCTTGTCGACATCTAAT
AAAAATATATATGAAGTTGAGCCCACAGTCAGTGTGGTCCAAGAAGGTTGCGGTCATAACTCCAGCTATA
TCCAGAATGCATACGACCTACCTAGGAACAGCCATATTCCTGGTCATTATGACCTCCTCCCAGTAAGACA
GAGCCCTGCCAATGGGCCGTCCCAGGACAAGCAATCTTAA

Translation (969 aa):
MHTPSIRSITHDAQTSSTGSSAPGTALCTEECVHGRCVSPDTCHCEPGWGGPDCSSGCDSDHWGPHCSNR
CQCQNGALCNPITGACVCAAGFRGWRCEELCAPGTHGKGCQLPCQCRHGASCDPRAGECLCAPGYTGVYC
EELCPPGSHGAHCELRCPCQNGGTCHHITGECACPPGWTGAVCAQPCPPGTFGQNCSQDCPCHHGGQCDH
VTGQCHCTAGYMGDRCQEECPFGSFGFQCSQHCDCHNGGQCSPTTGACECEPGYKGPRCQERLCPEGLHG
PGCTLPCPCDADNTISCHPVTGACTCQPGWSGHHCNESCPVGYYGDGCQLPCTCQNGADCHSITGGCTCA
PGFMGEVCAVSCAAGTYGPNCSSICSCNNGGTCSPVDGSCTCKEGWQGLDCTLPCPSGTWGLNCNESCTC
ANGAACSPIDGSCSCTPGWLGDTCELPCPDGTFGLNCSEHCDCSHADGCDPVTGHCCCLAGWTGIRCDST
CPPGRWGPNCSVSCSCENGGSCSPEDGSCECAPGFRGPLCQRICPPGFYGHGCAQPCPLCVHSSRPCHHI
SGICECLPGFSGALCNQVCAGGYFGQDCAQLCSCANNGTCSPIDGSCQCFPGWIGKDCSQACPPGFWGPA
CFHACSCHNGASCSAEDGACHCTPGWTGLFCTQRCPAAFFGKDCGRVCQCQNGASCDHISGKCTCRTGFT
GQHCEQRCAPGTFGYGCQQLCECMNNSTCDHVTGTCYCSPGFKGIRCDQAALMMEELNPYTKISPALGAE
RHSVGAVTGIMLLLFLIVVLLGLFAWHRRRQKEKGRDLAPRVSYTPAMRMTSTDYSLSGACGMDRRQNTY
IMDKGFKDYMKESVCSSSTCSLNSSENPYATIKDPPILTCKLPESSYVEMKSPVHMGSPYTDVPSLSTSN
KNIYEVEPTVSVVQEGCGHNSSYIQNAYDLPRNSHIPGHYDLLPVRQSPANGPSQDKQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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