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Report for CCDS91353.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
91353.1 Public Homo sapiens 10 TDRD1 24 110 108 CCDS HistoryNCBI Gene:56165Re-query CCDS DB by CCDS ID:91353.1Re-query CCDS DB by GeneID:56165See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 91353.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369282.5 ENSP00000358288.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369282.5Link to Ensembl Protein Viewer:ENSP00000358288.1Re-query CCDS DB by Nucleotide ID:ENST00000369282Re-query CCDS DB by Protein ID:ENSP00000358288
Original member Current member NCBI NM_001385367.1 NP_001372296.1 Accepted alive Link to Nucleotide Sequence:NM_001385367.1Link to Protein Sequence:NP_001372296.1Re-query CCDS DB by Nucleotide ID:NM_001385367Re-query CCDS DB by Protein ID:NP_001372296Link to BLAST:NP_001372296.1

Chromosomal Locations for CCDS 91353.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 114187832 114188156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114190961 114191019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114199173 114199317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114201410 114201515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114202238 114202298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114203072 114203176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114203388 114203567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114204073 114204216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114204722 114204893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114206244 114206330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114210581 114210748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114210860 114210967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114211866 114212036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114213346 114213588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114213977 114214114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114217545 114217655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114218414 114218584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114220568 114220843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114221357 114221476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114222587 114222703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114226049 114226216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114227910 114227956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114228038 114228125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114231486 114231517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3342 nt):
ATGAGTGTTAAATCGCCATTTAATGTGATGTCAAGAAATAATTTGGAAGCACCTCCTTGTAAGATGACAG
AG
CCATTTAATTTTGAGAAAAATGAAAACAAGCTTCCACCACATGAGTCTTTAAGAAGTCCTGGAACACT
T
CCTAACCACCCTAATTTCAGGCTGAAAAGCTCAGAGAATGGAAATAAAAAGAACAATTTTTTGCTTTGT
GAG
CAAACCAAACAATATTTGGCTAGTCAGGAAGACAATTCAGTTTCTTCAAACCCGAATGGCATCAACG
GA
GAAGTAGTTGGCTCCAAAGGAGACAGGAAAAAATTGCCAGCAGGAAACTCAGTGTCACCACCAAGTGC
T
GAAAGTAATTCACCACCCAAAGAAGTGAATATTAAGCCTGGAAATAATGTACGTCCTGCAAAATCAAAA
AAA
CTAAACAAGTTGGTCGAGAATTCCTTGTCCATAAGTAATCCAGGGCTCTTCACCTCCTTAGGACCTC
CT
CTTCGGTCCACAACTTGCCATCGCTGTGGCCTATTTGGATCGCTGAGGTGCTCTCAGTGCAAGCAGAC
C
TACTATTGCTCCACAGCATGTCAAAGAAGAGACTGGTCTGCACACAGCATCGTGTGCAGGCCTGTTCAG
CCA
AATTTCCACAAACTTGAAAATAAATCATCTATTGAAACAAAGGATGTGGAGGTAAACAATAAGAGTG
AC
TGTCCACTTGGAGTTACTAAGGAAATAGCCATTTGGGCTGAGAGAATAATGTTTTCTGATTTGAGAAG
T
CTACAACTCAAGAAAACCATGGAAATAAAGGGTACGGTTACCGAATTCAAACACCCAGGGGACTTCTAC
GTG
CAGTTATATTCTTCAGAAGTTTTAGAATACATGAACCAACTCTCTGCCAGCTTAAAAGAAACATATG
CA
AATGTGCATGAAAAAGACTATATTCCTGTTAAGGGGGAAGTTTGTATTGCCAAGTACACTGTTGATCA
G
ACCTGGAACAGAGCAATCATACAAAACGTTGATGTGCAGCAAAAGAAGGCACATGTCTTATATATTGAT
TAT
GGAAATGAAGAAATAATTCCATTAAACAGAATTTACCACCTCAACAGGAACATTGACTTGTTTCCTC
CT
TGTGCCATAAAGTGCTTTGTAGCCAATGTTATCCCAGCAGAAGGGAATTGGAGCAGTGATTGTATCAA
A
GCTACTAAACCACTGTTAATGGAGCAGTACTGCTCCATAAAGATTGTCGACATCTTGGAAGAGGAAGTG
GTT
ACCTTTGCTGTAGAAGTTGAGCTGCCAAATTCAGGAAAACTTTTAGACCATGTGCTTATAGAAATGG
GA
TATGGCTTGAAACCCAGTGGACAAGATTCTAAGAAGGAAAATGCAGATCAAAGTGATCCTGAAGATGT
T
GGAAAAATGACAACTGAAAACAACATTGTCGTAGACAAAAGTGACCTAATCCCAAAAGTGTTAACTTTG
AAT
GTAGGTGATGAGTTTTGTGGTGTGGTTGCCCACATTCAAACACCAGAAGACTTCTTTTGTCAACAAC
TG
CAAAGTGGCCGAAAGCTTGCTGAACTTCAGGCATCCCTTAGCAAGTACTGTGATCAGTTGCCTCCACG
C
TCTGATTTTTATCCAGCCATTGGTGATATATGTTGTGCTCAGTTCTCAGAGGATGATCAGTGGTACCGT
GCC
TCTGTTTTGGCTTACGCTTCTGAAGAATCTGTACTGGTCGGATATGTAGATTATGGAAACTTTGAAA
TC
CTTAGTTTGATGAGACTTTGTCCCATAATCCCAAAGTTGTTGGAATTGCCAATGCAAGCTATAAAGTG
T
GTACTAGCAGGAGTAAAGCCATCATTAGGAATTTGGACTCCAGAAGCTATTTGTCTCATGAAAAAACTT
GTA
CAGAACAAAATAATCACAGTGAAAGTGGTGGACAAGTTGGAAAACAGTTCCCTGGTGGAGCTTATTG
AT
AAATCCGAGACGCCTCATGTCAGTGTTAGCAAAGTTCTCCTAGATGCAGGCTTTGCTGTGGGAGAACA
G
AGTATGGTGACAGATAAACCCAGTGACGTGAAAGAAACCAGTGTTCCCTTGGGTGTGGAAGGAAAAGTA
AAT
CCATTGGAGTGGACATGGGTTGAACTTGGTGTTGACCAAACAGTAGATGTTGTGGTCTGTGTGATAT
AT
AGTCCTGGAGAATTTTATTGCCATGTGCTTAAAGAGGATGCTTTAAAGAAACTCAATGATTTGAACAA
G
TCATTAGCAGAACACTGCCAGCAGAAGTTACCTAATGGTTTCAAGGCAGAGATAGGACAACCTTGTTGT
GCT
TTTTTTGCAGGTGATGGTAGTTGGTATCGTGCTTTAGTCAAGGAAATCTTACCAAATGGACATGTTA
AA
GTACATTTTGTGGATTATGGAAACATCGAAGAAGTTACTGCAGATGAACTCCGAATGATATCATCAAC
A
TTTTTAAACCTTCCCTTTCAGGGAATACGGTGCCAGTTAGCAGATATACAGTCTAGAAACAAACATTGG
TCT
GAAGAAGCCATAACAAGATTCCAGATGTGTGTTGCTGGGATAAAATTGCAAGCCAGAGTGGTTGAAG
TC
ACTGAAAATGGGATAGGAGTTGAACTCACCGATCTCTCCACTTGTTATCCCAGAATAATTAGTGATGT
T
CTGATTGATGAACATCTGGTTTTAAAATCTGCTTCACCACATAAAGACTTACCAAATGACAGACTTGTT
AAT
AAACATGAGCTTCAAGTTCATGTACAGGGACTTCAAGCTACCTCTTCAGCTGAGCAATGGAAGACGA
TA
GAATTGCCAGTGGATAAAACTATACAAGCAAATGTATTAGAAATCATAAGCCCAAACTTGTTTTATGC
T
CTACCAAAAGGGATGCCAGAAAATCAGGAAAAGCTGTGCATGTTGACAGCTGAATTATTAGAATACTGC
AAT
GCTCCGAAAAGTCGACCACCCTATAGACCAAGAATTGGAGACGCATGCTGTGCCAAATACACAAGTG
AT
GATTTTTGGTATCGTGCAGTTGTTCTGGGGACATCAGACACTGATGTGGAAGTGCTCTATGCAGACTA
T
GGAAACATTGAAACCCTGCCTCTTTGCAGAGTGCAACCAATCACCTCTAGCCACCTGGCGCTTCCTTTC
CAA
ATTATTAGATGTTCACTTGAAGAAAAGATGTATAGGATGAATTGCTGCTGCACAGAGTTACAGAAAC
AA
GTTGAAAAACATGAACATATTCTTCTCTTCCTCTTAAACAATTCAACCAATCAAAATAAATTTATTGA
A
ATGAAAAAACTGTTAAAAAAAACAGCATCTCTTGGAGGTAAACCCTTATGA


Translation (1113 aa):
MSVKSPFNVMSRNNLEAPPCKMTEPFNFEKNENKLPPHESLRSPGTLPNHPNFRLKSSENGNKKNNFLLC
E
QTKQYLASQEDNSVSSNPNGINGEVVGSKGDRKKLPA
GNSVSPPSAESNSPPKEVNIKPGNNVRPAKSK
K
LNKLVENSLSISNPGLFTSLGPPLRSTTCHRCGLF
GSLRCSQCKQTYYCSTACQRRDWSAHSIVCRPVQ
P
NFHKLENKSSIETKDVEVNNKSDCPLGVTKEIAIWAERIMFSDLRSLQLKKTMEIKGTVTEFKHPGDFY
V
QLYSSEVLEYMNQLSASLKETYANVHEKDYIPVKGEVCIAKYTVDQ
TWNRAIIQNVDVQQKKAHVLYID
Y
GNEEIIPLNRIYHLNRNIDLFPPC
AIKCFVANVIPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEV
V
TFAVEVELPNS
GKLLDHVLIEMGYGLKPSGQDSKKENADQSDPEDVGKMTTENNIVVDKSDLIPKVLTL
N
VGDEFCGVVAHIQTPEDFFCQQLQSG
RKLAELQASLSKYCDQLPPRSDFYPAIGDICCAQFSEDDQWYR
A
SVLAYASEESVLVGYVDYGNFEILSLMRLCPIIPKLLELPMQAIKCVLA
GVKPSLGIWTPEAICLMKKL
V
QNKIITVKVVDKLENSSLVELIDKSETPHVSVSKVLLDAGFAVGEQSMVTDKPSDVKETS
VPLGVEGKV
N
PLEWTWVELGVDQTVDVVVCVIYSPGEFYCHVLKED
ALKKLNDLNKSLAEHCQQKLPNGFKAEIGQPCC
A
FFA
GDGSWYRALVKEILPNGHVKVHFVDYGNIEEVTADELRMISSTFLNLPFQGIRCQLADIQSRNKHW
S
EEAITRFQMCVAGIKLQARVVEVTENGIGVELTDLSTCYPRIISDVLIDEHLVLKSASPHKDLPNDRLV
N
KHELQVHVQGLQ
ATSSAEQWKTIELPVDKTIQANVLEIISPNLFYALPKGMPENQEKLCMLTAELLEYC
N
APKSRPPYRPRIGDACCAKYT
SDDFWYRAVVLGTSDTDVEVLYADYGNIETLPLCRVQPITSSHLALPF
Q
IIRCSLE
EKMYRMNCCCTELQKQVEKHEHILLFLLNNSTNQNKFIEMKKLLKKTASLGGKPL



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser